Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10736g00001 ATGTCGGTGATGGCCGATAATTCAGCAAACAATGGAAGCCACGAGGTGGTTTTGAACGTAAACGGTGATGCCTCCAAAAAGTCCCATGACTCAGGCAACCAAGACTCTGTACCTATTCTGCAGAAGTTGGCAGCAGAATTGGTGGGGACGTACTTCTTGATATTCGCAGGGTGTGGTTCGGTGGTGGTGAACCTTGACAACGAGAAGGTGATCACACAACCTGGGATTTCAATTGTTTGGGGTCTCGCTGTTATGGTGTTGGTTTATTCTGTCGGTCACATCTCTGGTGCTCATTTCAACCCTGCTGTCACCCTTGCTCATGCTTCTACCAAAAGGTTTCCATTCAAGCTGGTACCAGCTTATGTGGTAGCTCAGGTCGTTGGATCCTTACTTGCTAGTGGAACTCTCAGACTTATATTCAGTGGCAAGAATGACCATTTTGTAGGAACACTCCCCGCTGGTTCTGACTTGCAATCTTTTGTGGTCGAATTCATAATCACTTTTTATCTCATGTTCGTCATTTCTGGAGTTGCCACCGATAACAGAGCGATTGGTGAGTTGGCAGGGCTTGCAGTTGGGTCTACGATACTGCTAAATGTGATGTTTGCCGGGCCAATCACTGGAGCATCAATGAATCCAGCAAGAAGCTTGGGGCCTGCTATTGTGCACAATGAATACAGAGGAATATGGATATATTTGGTGTCACCAACTCTTGGAGCTGTGGCCGGTACATGGGCCTACAATTTCATCAGGTACACAAACAAGCCAGTTCGTGAGATCACCAAGAGTGCCTCTTTCCTCAAAGGTGGCCAAGCTGAGTGA 822 0.472 MSVMADNSANNGSHEVVLNVNGDASKKSHDSGNQDSVPILQKLAAELVGTYFLIFAGCGSVVVNLDNEKVITQPGISIVWGLAVMVLVYSVGHISGAHFNPAVTLAHASTKRFPFKLVPAYVVAQVVGSLLASGTLRLIFSGKNDHFVGTLPAGSDLQSFVVEFIITFYLMFVISGVATDNRAIGELAGLAVGSTILLNVMFAGPITGASMNPARSLGPAIVHNEYRGIWIYLVSPTLGAVAGTWAYNFIRYTNKPVREITKSASFLKGGQAE 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10736g00001 273 Pfam Major intrinsic protein 36 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr10736g00001 273 PRINTS Major intrinsic protein family signature 230 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr10736g00001 273 PRINTS Major intrinsic protein family signature 41 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr10736g00001 273 PRINTS Major intrinsic protein family signature 117 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr10736g00001 273 PRINTS Major intrinsic protein family signature 162 180 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr10736g00001 273 PRINTS Major intrinsic protein family signature 80 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr10736g00001 273 PRINTS Major intrinsic protein family signature 193 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr10736g00001 273 CDD MIP 41 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr10736g00001 273 Gene3D Glycerol uptake facilitator protein. 3 263 IPR023271 -
Mupr10736g00001 273 PANTHER AQUAPORIN NIP2-1 27 267 IPR034294 -
Mupr10736g00001 273 SUPERFAMILY Aquaporin-like 38 261 IPR023271 -
Mupr10736g00001 273 ProSitePatterns MIP family signature. 98 106 IPR022357 -
Mupr10736g00001 273 NCBIfam MIP family channel protein 45 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10736g00001 Mupr-Chr10736 1113 2924 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10736g00001 37 268 Major Intrinsic Protein MIP AT5G37820 63.362 4.81e-102 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10736g00001 K09874 - gmx:100786924 495.352