Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10720g00002 ATGCCTCGTCTTCCCGTCCGGAATGGTAGAGTTATCCACTGGACAGAAGATGAACACAGGTTATTTCTTCAAGGACTCAAACTATATAAGAAGAATTGGGCATACATTGCACGAAAGGTGGTGAGGACAAGAACTGCCACCCAAGTTGCCAGCCACTACAAAAAATATAAACTTCACAAAAAATACACAAGTGTAAAACAAAAGAAAAGCCGAAGCATCTTGGACATTACCTTAAAGAATGACTACCAAAACATCTCAGAACATCGAAGCCAACAACTATTGCCCCAACAACCAGAACTTGAAAGAATTCAGCAATTTCCTCAGTTCATTGACCGTTATTATTATAACTGGGTTCCAACTCCAAATGAAGAGTTACCTCACCATGACCAACAGATGTTTCAAGAACTACAACAAGAGTTAAAGCCACCAAATAATATGTCACCCTATGAAATGAACGGCTTTAATTCTATCATATAA 477 0.3857 MPRLPVRNGRVIHWTEDEHRLFLQGLKLYKKNWAYIARKVVRTRTATQVASHYKKYKLHKKYTSVKQKKSRSILDITLKNDYQNISEHRSQQLLPQQPELERIQQFPQFIDRYYYNWVPTPNEELPHHDQQMFQELQQELKPPNNMSPYEMNGFNSII 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10720g00002 158 CDD SANT 14 49 IPR001005 -
Mupr10720g00002 158 ProSiteProfiles Myb-like domain profile. 14 57 IPR001005 -
Mupr10720g00002 158 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 61 IPR017930 -
Mupr10720g00002 158 Gene3D - 14 102 - -
Mupr10720g00002 158 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 10 152 IPR043363 -
Mupr10720g00002 158 ProSiteProfiles SANT domain profile. 14 61 IPR017884 -
Mupr10720g00002 158 NCBIfam myb-like DNA-binding domain, SHAQKYF class 12 60 IPR006447 GO:0003677
Mupr10720g00002 158 Pfam Myb-like DNA-binding domain 14 57 IPR001005 -
Mupr10720g00002 158 SMART sant 10 59 IPR001005 -
Mupr10720g00002 158 SUPERFAMILY Homeodomain-like 11 61 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10720g00002 Mupr-Chr10720 5089 6792 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr10720g00002 Myb_DNA-binding 1.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10720g00002 - - gmx:102664863 78.5666