Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10713g00001 ATGGCACAATTTGGCTTGCTAATAACCCTCCTACTTGCTCCCTTTCTATTCTCCTCAATTGCTTCCGGTTACTCATTCAAAGACATCCAATGGTGGTGTAAGCAAACCCCTTACCCCCAGCCATGCGAGTACTACTTAACCAACAACGCCTTCAACAAACCCATAAAAAGCAAATCCGATTTCCTCAAAGTGTCCCTTCAACTCGCCCTAGAGAGGGCACAAAAGGGCGAACAAAACACCCACTCCCTAGGGCCAAAGTGCCGCAACGCGCATGAAAAAGCTGCATGGGCAGATTGCCTCGAACTCTACCAATACACAATCCAACGGCTCAACAAAACTGCAAACCCTAACACCAAGTGCACACAAACCGACGTCCAAACATGGCTCAGCACGGCCGTCACAAACCTCGAAACATGCAAAAACGGGTTCTACGACCTTGGAGTCCCCGACTATGTCCTACCCTTGTTGTCCAACAATGTCACAAAGTTACTAAGCAACACTCTCTCTCTCAACAAAGGTCCTTCCCAATACAAACCACCAAGTTATAACAAAGAAGGGTTCCCAACGTGGGTGAAGCCAGGTGATAGAAAGTTGTTGCAAGCTTCTTCTCCAGCTTCAAAGGCCAACGTAGTGGTGGCAAAAGATGGGTCTGGAAAGTACACAACGGTGAGTGCAGCCGTAAATGCTGCTCCAAGTGGCAGTGGAAGGTATGTGATATACGTGAAGGCAGGGATATACAATGAACAAGTTGAGATAAAAGCAAAGAATATAATGTTGGTGGGAGATGGTATTGGAAAGACTATAATCACCGGTAGCAAAAGCGTTGGAGGGGGCACCACAACCTTCCGTTCAGCCACCGTTGCTGCTGTGGGTGATGGATTTATGGCTCAAGACATAACATTCAGGAACACTGCAGGAGCAGCAAATCACCAAGCTGTGGCATTACGTTCTGGATCCGACCTCTCAGTGTTCTACAGATGTAGTTTTGAAGGTTACCAAGACACACTGTATGTCCACTCCGATAGACAATTCTATAGAGAATGTGATATATATGGCACTGTTGACTTCATCTTTGGCAATGCTGCTGTTGTGTTCCAAAACTGTAACATATTTGCAAGAACCCCTCCACAGAAAACCATCACAGTGACTGCTCAGGGAAGAACTGACCCTAACCAGAACACTGGAATCATCATCCACAATTCCAAGGTCACAGGTGCCTCTGGCTTCAGCTCAAGCTCTGTCAATTCCTACCTTGGTAGGCCCTGGCAGAAGTACTCAAGGACAGTCTTCATGAAGACCTACCTTGACAGCCTCATCAACCCTGCTGGCTGGATGGAATGGAATGGCAACTTTGCATTGGACACTTTGTATTATGCTGAGTATGCTAACACTGGTCCTGGCTCCTCCACTGCCAATAGGGTCACTTGGAAGGGCTACCATGTTCTCACTACTGCTTCTCAGGCCTCACCTTTCACTGTTGCCAACTTCATTGCTGGTAACTCTTGGATACCAAGTTCTGTCCCTTTCACCTCTGGCCTTTGA 1542 0.4728 MAQFGLLITLLLAPFLFSSIASGYSFKDIQWWCKQTPYPQPCEYYLTNNAFNKPIKSKSDFLKVSLQLALERAQKGEQNTHSLGPKCRNAHEKAAWADCLELYQYTIQRLNKTANPNTKCTQTDVQTWLSTAVTNLETCKNGFYDLGVPDYVLPLLSNNVTKLLSNTLSLNKGPSQYKPPSYNKEGFPTWVKPGDRKLLQASSPASKANVVVAKDGSGKYTTVSAAVNAAPSGSGRYVIYVKAGIYNEQVEIKAKNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVAAVGDGFMAQDITFRNTAGAANHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSDRQFYRECDIYGTVDFIFGNAAVVFQNCNIFARTPPQKTITVTAQGRTDPNQNTGIIIHNSKVTGASGFSSSSVNSYLGRPWQKYSRTVFMKTYLDSLINPAGWMEWNGNFALDTLYYAEYANTGPGSSTANRVTWKGYHVLTTASQASPFTVANFIAGNSWIPSSVPFTSGL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10713g00001 513 SMART complete 241 412 IPR006633 -
Mupr10713g00001 513 NCBIfam pectinesterase inhibitor domain 8 172 IPR006501 GO:0004857
Mupr10713g00001 513 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 172 IPR035513 -
Mupr10713g00001 513 Pfam Pectinesterase 209 500 IPR000070 GO:0030599|GO:0042545
Mupr10713g00001 513 PANTHER PECTINESTERASE 16 504 - -
Mupr10713g00001 513 FunFam Pectinesterase 24 173 - -
Mupr10713g00001 513 ProSitePatterns Pectinesterase signature 1. 233 252 IPR018040 -
Mupr10713g00001 513 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 173 IPR035513 -
Mupr10713g00001 513 Pfam Plant invertase/pectin methylesterase inhibitor 28 170 IPR006501 GO:0004857
Mupr10713g00001 513 ProSitePatterns Pectinesterase signature 2. 350 359 IPR033131 -
Mupr10713g00001 513 SMART PMEI_2 24 170 IPR006501 GO:0004857
Mupr10713g00001 513 FunFam Pectinesterase 203 513 - -
Mupr10713g00001 513 CDD PMEI-like_3 31 175 - -
Mupr10713g00001 513 Gene3D - 204 513 IPR012334 -
Mupr10713g00001 513 SUPERFAMILY Pectin lyase-like 203 505 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10713g00001 Mupr-Chr10713 16431 20088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10713g00001 1 513 Carbohydrate Esterase AT2G45220 67.184 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10713g00001 K01051 - gmx:100794948 918.302