Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10705g00009 ATGGCGTCTGAAGGCTTCACCGACAAGAACACTGTGTTCAGAAAACTCAAGGCCAAGTCCGAAAATAAGATGTGTTTCGATTGCAATGCAAAGAACCCTACCTGGGCGTCAGTCACGTATGGGATCTTCCTCTGCATTGATTGCTCTGCCGTTCATCGCAGTCTCGGCGTGCACATCAGCTTCGTGAGGCAAGTCTACAAATTTAGACTCATGGAGTCCTGA 222 0.4865 MASEGFTDKNTVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRQVYKFRLMES 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10705g00009 73 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Mupr10705g00009 73 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Mupr10705g00009 73 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 65 IPR001164 GO:0005096
Mupr10705g00009 73 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 6 63 - -
Mupr10705g00009 73 SUPERFAMILY ArfGap/RecO-like zinc finger 11 65 IPR037278 -
Mupr10705g00009 73 Pfam Putative GTPase activating protein for Arf 11 65 IPR001164 GO:0005096
Mupr10705g00009 73 SMART arf_gap_3 10 72 IPR001164 GO:0005096
Mupr10705g00009 73 Gene3D Arf GTPase activating protein 1 69 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10705g00009 Mupr-Chr10705 26364 29019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10705g00009 7 65 C2H2 Transcription Factor Family AT3G07940 49.153 1.79e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10705g00009 K12493 - gmx:100785169 134.42