Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10690g00002 ATGGATGGTATTCACGGGGGTGATTCTCGGATACACATCAGTGATGGACAGCATCCTATACATGTGCCATATGTGCAAGAACATGACCATCATGGACTGCACCATATGAGCAATGGCAATGGGATTGATGATGATCAGAATGATGAAGCCGATACTAACTGTGGTGGTGGAAGTGAGAGTGTGGAAGGTGAAGTCCCCTCCAACCATGGAAATCTCCCTGACAATCATACTGTAATGATGGATCAAGGGAGTGATGGTGGGGATCAGCTTACATTGTCTTTTCAGGGCCAGGTTTATGTCTTTGACTCCGTGTCACCAGAAAAGGTTCAAGCTGTACTACTGTTACTGGGAGGCCGCGAAATACCTCCCACTATGCCTGCCATCCCAGTATCTCCTCACCATAATAATCGGGGATTTACTGGTACTCCGCAAAAATTCAGTGTCCCTCAGAGATTAGCTTCATTGATTAGGTTTCGTGAAAAGCGGAAGGAACGAAATTTTGACAAAAAAATTCGGTATACTGTTCGAAAAGAAGTAGCATTAAGGATGCAAAGAAATAAAGGTCAGTTTACATCTTCTAAGTCCAATCATGATGAATCTGCATCAACTGCAACAAATTGGGGGACGAATGAAAACTGGACGGCGGACAATAATGGATCCCAGCAGCAAGATATTGTGCACTGTGGCATCAGTGAGAAGTGCACACCAATGATGCGACGTGGGCCTGAAGGGCCAAGAACCCTCTGCAATGCTTGTGGTCTTATGTGGGCAAATAAGGGAACCCTGAGGGACCTATCAAGGGCAGCACCCTTATCTGGACATAATTCCTCATTAATCAAGAATGAGGTCAATAAAAATTTAGAGGCCAGCCAGATAGTCCATAGAATTGCAGGAGAAGCTGGTGATTCGTCGTGA 915 0.4514 MDGIHGGDSRIHISDGQHPIHVPYVQEHDHHGLHHMSNGNGIDDDQNDEADTNCGGGSESVEGEVPSNHGNLPDNHTVMMDQGSDGGDQLTLSFQGQVYVFDSVSPEKVQAVLLLLGGREIPPTMPAIPVSPHHNNRGFTGTPQKFSVPQRLASLIRFREKRKERNFDKKIRYTVRKEVALRMQRNKGQFTSSKSNHDESASTATNWGTNENWTADNNGSQQQDIVHCGISEKCTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSRAAPLSGHNSSLIKNEVNKNLEASQIVHRIAGEAGDSS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10690g00002 304 Gene3D - 226 269 IPR013088 GO:0006355|GO:0008270
Mupr10690g00002 304 Pfam tify domain 88 117 IPR010399 -
Mupr10690g00002 304 Pfam CCT motif 151 193 IPR010402 GO:0005515
Mupr10690g00002 304 CDD ZnF_GATA 226 266 IPR000679 GO:0006355|GO:0043565
Mupr10690g00002 304 SMART GATA_3 219 272 IPR000679 GO:0006355|GO:0043565
Mupr10690g00002 304 MobiDBLite consensus disorder prediction 70 84 - -
Mupr10690g00002 304 MobiDBLite consensus disorder prediction 188 211 - -
Mupr10690g00002 304 MobiDBLite consensus disorder prediction 31 84 - -
Mupr10690g00002 304 ProSiteProfiles CCT domain profile. 151 193 IPR010402 GO:0005515
Mupr10690g00002 304 SMART tify_2 83 118 IPR010399 -
Mupr10690g00002 304 PANTHER GATA TRANSCRIPTION FACTOR 28 28 280 IPR045280 GO:0006355
Mupr10690g00002 304 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 227 271 - -
Mupr10690g00002 304 ProSiteProfiles Tify domain profile. 83 118 IPR010399 -
Mupr10690g00002 304 Pfam GATA zinc finger 227 261 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10690g00002 Mupr-Chr10690 18815 23473 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10690g00002 1 303 Tify Gene Family AT1G51600 62.338 1.40e-133 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr10690g00002 CCT 8.7e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10690g00002 - - gmx:100812262 548.895