Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10662g00001 TTGGAAGCTTGTGTGTGGCTGGAGGAGAGTTTGAAGAAGTTTGAACGTATTCTGGTTGTGATTTCACACTCTCAGGACTTTCTGAATGGTGTCTGCACAAATATTATCCACATGCAAAGCAAAAAACTGAAGATGTACACTGGTAACTACGATCAATATGTTCAGACACGTTCTGAGCTAGAAGAGAACCAGATGAAACAGTACAAGTGGGAGCAGGAGCAGATTTCCTCAATGAAGGAATATATTGCCCGATTTGGCCATGGTTCTGCAAAACTAGCTCGCCAGGCACAGAGCAAGGAGAAAACACTTGCAAAAATGGAACGAGGTGGACTAGCAGAGAAGGTGGTTAGGGACAAAGTTTTGGTATTCCGATTTACTGATGTGGGAAAACTTCCGCCTCCTGTTCTCCAGTTTGTTGAGGTGACATTTGGTTATACTCCTGAAAACCTCATCTACAAGAACATTGACTTTGGGGTTGATTTAGATTCTAGGGTTGCACTGGTTGGACCCAATGGTGCTGGGAAGAGTACACTGCTGAAACTAATGACAGGTGAGTTGATGCCTACTGATGGCATGGTACGACGTCATAATCATCTTCGGATTGCACAATATCACCAACATTTGGCTGAAAAGCTGGACATGGAAATGTCTGCTCTCATGTTTATGATTAGAGAATACCCTGGAAATGAGGAGGAGAGGATGAGAGCAGCAATTGGAAAGTTTGGGCTGTCAGGTAAAGCCCAGGTGATGCCAATGAAGAACTTGTCCGATGGGCAGAGGAGCCGAGTGATATTTGCTTGGTTAGCTTTCAGGCAGCCTCAAATGCTGCTTTTGGATGAGCCAACTAATCACTTGGATATTGAGACAATTGACTCGTTGGCTGAGGCATTGAATGAATGGGACGGTGGCATGGTGCTTGTCAGCCATGATTTTAGGCTTATTAATCAGGTGGCGCATGAGATATGGGTATGTGCTGATCAAACTGTGACCAGATGGGAGGGTGACATTATGCAATTCAAGGAGCATCTAAGGTCAAAGGCGGTATACAAGTTTATGATTTTTGTCCGAGCCGAGATGCCCCCCGGATTTGGACTGATTGTGTGGACGGCATTACCCTCAGCACTCAGCAGAGTGTATTTATCAATTGAGCATGCTAAAGCTAAATTCAAGACAAAAACTGTTCACAAGGGAGAAATTACTTATGATGAATTGTCTACAAAAGGAAAGGAATTAAACAATGAATTTCTAAACAAAACATCTTCTAGA 1266 0.4344 LEACVWLEESLKKFERILVVISHSQDFLNGVCTNIIHMQSKKLKMYTGNYDQYVQTRSELEENQMKQYKWEQEQISSMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLAEKVVRDKVLVFRFTDVGKLPPPVLQFVEVTFGYTPENLIYKNIDFGVDLDSRVALVGPNGAGKSTLLKLMTGELMPTDGMVRRHNHLRIAQYHQHLAEKLDMEMSALMFMIREYPGNEEERMRAAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAFRQPQMLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCADQTVTRWEGDIMQFKEHLRSKAVYKFMIFVRAEMPPGFGLIVWTALPSALSRVYLSIEHAKAKFKTKTVHKGEITYDELSTKGKELNNEFLNKTSSR 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10662g00001 422 CDD ABCF_EF-3 136 328 - -
Mupr10662g00001 422 Gene3D - 1 89 IPR027417 -
Mupr10662g00001 422 Pfam ABC transporter 36 112 IPR032781 -
Mupr10662g00001 422 FunFam ATP-binding cassette sub-family F member 3 96 350 - -
Mupr10662g00001 422 SMART AAA_5 161 328 IPR003593 GO:0016887
Mupr10662g00001 422 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 1 346 - -
Mupr10662g00001 422 Pfam ABC transporter 152 283 IPR003439 GO:0005524
Mupr10662g00001 422 Coils Coil 43 63 - -
Mupr10662g00001 422 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 136 351 IPR003439 GO:0005524
Mupr10662g00001 422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 331 IPR027417 -
Mupr10662g00001 422 Gene3D - 100 350 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10662g00001 Mupr-Chr10662 578 2402 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10662g00001 136 353 Calmodulin-binding Proteins AT2G36910 24.194 5.83e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10662g00001 K06185 - gmx:100809491 676.011