Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1064g00001 ATGGGACGATCACCATGCTGTGACAAGGTGGGTTTAAAGAAAGGACCATGGACGCCAGAGGAAGATCAGAAGCTCTTGGCTTATATTGAAGAACATGGCCATGGAAGCTGGCGTGCTTTGCCAGCAAAAGCTGGACTCGAGAGGTGTGGCAAGAGCTGCAGATTGAGATGGACTAATTATTTAAGGCCTGATATTAAGAGGGGAAAGTTCAGTATGCAAGAAGAACAAACCATCATTCAACTTCATGCACTCTTAGGGAACAGATGGTCGGCAATAGCCACACATTTGCCAAAGAGAACGGATAATGAGATCAAGAACTATTGGAACACGCATCTTAAGAAAAGGTTAGACAAAATGGGAATTGATCCTGTGACTCACAAACCAAAAAACGATGCCCTTCTCTCCAGCGAGGGCCCTTCCAAGACTGCTGCCAACCTCAGCCACATGGCTCAGTGGGAGAGTGCCAGGCTCGAAGCCGAAGCAAGATTGGTCAGAGAATCAAAGCTACGCACTTCACACTCCTCATCATCATCTTCTGCTCCAATCTTACCCTCATCACTTTCTCTTGACCATGCTTGGAACAACAATGGTGGTAGTACTACTATGATCACCAGTGACCTTGAGTCCCCCACGTCTACCTTGTCTGAGAACAACGCGCCACCGGTTATGACTAGTGTTGCTTCTTCCGAGAGAGGGACGATGAAGGAAGAAGCAGAACAAGAGTGGAAAGGCTATGAATACAAAGATGGCATAGAGAATTCAATGCCTTTCACGACCAGTACTAGTCATGCACATGCACATGCACACCCACATGTTGCTCACCACGGATTCACCGGCCTTTTGCTCAATACTAACTCCGCCGACCGGAGTTTGTCGTCCGATGGTGCCGGAGACTCTAATAATTATCATGCTAATCATGGTGCTAATAACGGTGGTGCTGATGGTGAATTATACGAAGAGAATAAGCACTACTGGAACAACATTCTTAATTTGATGAATTATTCTTCACCTTCGGATTCTCCCATGTTC 1029 0.4636 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLERCGKSCRLRWTNYLRPDIKRGKFSMQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLDKMGIDPVTHKPKNDALLSSEGPSKTAANLSHMAQWESARLEAEARLVRESKLRTSHSSSSSSAPILPSSLSLDHAWNNNGGSTTMITSDLESPTSTLSENNAPPVMTSVASSERGTMKEEAEQEWKGYEYKDGIENSMPFTTSTSHAHAHAHPHVAHHGFTGLLLNTNSADRSLSSDGAGDSNNYHANHGANNGGADGELYEENKHYWNNILNLMNYSSPSDSPMF 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1064g00001 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mupr1064g00001 343 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mupr1064g00001 343 CDD SANT 69 112 IPR001005 -
Mupr1064g00001 343 CDD SANT 16 61 IPR001005 -
Mupr1064g00001 343 FunFam Transcription factor MYB39 68 136 - -
Mupr1064g00001 343 SMART sant 13 63 IPR001005 -
Mupr1064g00001 343 SMART sant 66 114 IPR001005 -
Mupr1064g00001 343 MobiDBLite consensus disorder prediction 170 187 - -
Mupr1064g00001 343 FunFam MYB-related transcription factor 13 66 - -
Mupr1064g00001 343 MobiDBLite consensus disorder prediction 200 240 - -
Mupr1064g00001 343 MobiDBLite consensus disorder prediction 121 142 - -
Mupr1064g00001 343 Gene3D - 13 66 - -
Mupr1064g00001 343 MobiDBLite consensus disorder prediction 168 187 - -
Mupr1064g00001 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mupr1064g00001 343 Gene3D - 68 136 - -
Mupr1064g00001 343 MobiDBLite consensus disorder prediction 200 231 - -
Mupr1064g00001 343 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mupr1064g00001 343 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mupr1064g00001 343 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr1064g00001 343 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr1064g00001 343 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1064g00001 Mupr-Chr1064 3380 6357 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1064g00001 1 343 MYB Transcription Factor Family AT3G01140 55.738 3.29e-118 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr1064g00001 Myb_DNA-binding 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1064g00001 K09422 - gmx:100794047 515.383