Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10633g00002 ATGAAAATAAAAACGAAAAAGACAAGAAAAGAAAAAAGAAAGAAGAAGGAACAGGGCAATGCACTAGCGCGTAGTCAAGAGAATCACAACTCAAGAGTGCATGTGAGAGTGAAAGCGGCCGTTGAGGTTCCCAGAGGGGTATCGGAACGGGCAATCGATGGTGGGATTTGGGACATGTGCAGTGATTCAAAAAGTAAACTTTCTTCCCCAAACCACGCCATGGAGAGTAATCTTCTGAAGCAGAATCTAGATGGTCTCTACAACTTCTCGGTTTTGCTTGAATTGTCTGCATCCGATGATTTTGAAGCTTTCAAGAGAGAAGTGGATGAAAGGGGCTTAGATGTCAACGAGGCAGGCTTTTGGTATGGCAGAAGAATTGGGTCAAAGAAGATGGGATCTGAAACGAGGACCCCCCTCATGATTGCTTCTTTGTTTGGAAGCACTAAGGTGCTCAAGTATATTCTTGAGGCAGGAAGTGTTGATGTAAACAGGGTCTGTGGTTCGGATAGGGCCACTGCTCTCCATTGTGCTGCTGCTGGGGGCTCTGAATCCTCACTTGAGATTGTGAAGCTCTTGCTAGATGCTGGGGCTGATGCTGAAAGCCTTGATGCTAGTGGAAACAAGCCAGTTAATCTGATTGCTCCTGCCTTTGATTCTTCGTCCAAATCACGAAGGAAGGCTATGGAGTTGTTTCTCAGGGGCGGGGAAAGAGATGAATTCATCCAGGAGATGGAGCTGCAGATGTTCTCTGTTCCTTTCTCATCAAAAGAAGGTGCAGAGAAGAAAGAAGGAAGTGATAAGAAAGAATATCCTGTTGATATATCTTTGCCTGACATAAACAACGGTGTGTATGGGTCAGACGAGTTTAGGATGTACAGTTTCAAGGTGAAGCCTTGCTCAAGGGCTTACTCCCATGACTGGACAGAGTGTCCATTTGTTCACCCAGGGGAGAATGCAAGGAGGAGAGACCCACGGAAATATCCTTATAGCTGTGTTCCTTGCCCAGAGTTTCGCAAAGGGACCTGCCAGAAGGGTGATTCCTGTGAGTATGCTCATGGTGTGTTTGAGTCCTGGCTACATCCTGCCCAATACCGAACCAGGCTTTGCAAGGATGAGACTGGTTGCACTAGAAAAGTCTGCTTCTTTGCTCACAAACCTGAAGAGTTACGCCCTGTGTATGCTTCCACTGGTTCAGCTATGCCTTCTCCAAAATCCTATTCAACTAGCGCACTTGACATGACAGCCATGAGTCCACTGTCTCTCAGTTCCTCATCTTTGCCTATGCCAACTGTTTCAACCCCACCCATGTCTCCCCTGGCAGCAGCTTCATCTCCCAAGAGTGGAAACTTGTGGCAGAACAAAGTAAACCTTACTCCACCATCACTGCAGCTCCCAGGTAGCCGATTGAAGGCTGCTTTGAGTGCCAGGGATCTGGATCTGGAGATGGAACTGCTTGGTCTCGAAAGCCCTGCTCGTCAACAACAGCAGCAGCAACAACAATTGATAGAAGAGATTGCCAGGATCTCTTCCCCATCTTTCCGGAGCAAGGAATTCAATAGGATTGGTGATTTGAATCCAACTAACCTTGATGACCTGTTAGCATCTGCCGATCCTTCTGTATTATCTCAACTACATGGACTCTCTGTGCAACCTTCAACACCCACACAGTTGCAGCAATCTCCAAGTGGGCTTCAGATGCGCCAAAACATGAACCACCTTCGTGCTAGTTATCCATCCAATATCCCTTCCTCTCCTGTGAGAAAGCCCTCGGCATTTGGGTTTGACTCATCAGCTGCTGTGGCAGCTGCAGTGATGAATTCCAGGTCTGCTGCCTTTGCAAAGCGAAGCCAAAGTTTTATTGATCGTGGAGCTGCAACCCATCATCTTGGGCTGTCTTCAGTTTCCAACCCTTCCTGTAGGGTGTCCTCTACCCTTTCAGATTGGAGTTCCCCTACTGGGAAACTGGATTGGGGCGTTAATGGAGACGAGCTGAACAAGCTGAGGAAATCTGCTTCTTTTGGGTTCAGAAATAATGGGGTAACTGCAACTGCATCCACCAGAGCACAGCCAGAGCATGTGGAGCCTGATGTCTCGTGGGTTCATTCATTGGTTAGAGATGTTCCCTCTGAGAGGTCTGAGATATTTGGTGCCGAGAATCAGCACTATGATCTCAGTAAAGAGATGCTTTCACCATGGGTGGAGCAGCTGTATATAGAGCAGGAGCAGATGGTAGCATGA 2238 0.4759 MKIKTKKTRKEKRKKKEQGNALARSQENHNSRVHVRVKAAVEVPRGVSERAIDGGIWDMCSDSKSKLSSPNHAMESNLLKQNLDGLYNFSVLLELSASDDFEAFKREVDERGLDVNEAGFWYGRRIGSKKMGSETRTPLMIASLFGSTKVLKYILEAGSVDVNRVCGSDRATALHCAAAGGSESSLEIVKLLLDAGADAESLDASGNKPVNLIAPAFDSSSKSRRKAMELFLRGGERDEFIQEMELQMFSVPFSSKEGAEKKEGSDKKEYPVDISLPDINNGVYGSDEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKGTCQKGDSCEYAHGVFESWLHPAQYRTRLCKDETGCTRKVCFFAHKPEELRPVYASTGSAMPSPKSYSTSALDMTAMSPLSLSSSSLPMPTVSTPPMSPLAAASSPKSGNLWQNKVNLTPPSLQLPGSRLKAALSARDLDLEMELLGLESPARQQQQQQQQLIEEIARISSPSFRSKEFNRIGDLNPTNLDDLLASADPSVLSQLHGLSVQPSTPTQLQQSPSGLQMRQNMNHLRASYPSNIPSSPVRKPSAFGFDSSAAVAAAVMNSRSAAFAKRSQSFIDRGAATHHLGLSSVSNPSCRVSSTLSDWSSPTGKLDWGVNGDELNKLRKSASFGFRNNGVTATASTRAQPEHVEPDVSWVHSLVRDVPSERSEIFGAENQHYDLSKEMLSPWVEQLYIEQEQMVA 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10633g00002 745 ProSiteProfiles Zinc finger C3H1-type profile. 328 355 IPR000571 GO:0046872
Mupr10633g00002 745 SUPERFAMILY Ankyrin repeat 85 223 IPR036770 -
Mupr10633g00002 745 SMART ANK_2a 169 201 IPR002110 GO:0005515
Mupr10633g00002 745 SMART ANK_2a 134 164 IPR002110 GO:0005515
Mupr10633g00002 745 ProSiteProfiles Ankyrin repeat region circular profile. 169 203 - -
Mupr10633g00002 745 SMART c3hfinal6 363 386 IPR000571 GO:0046872
Mupr10633g00002 745 SMART c3hfinal6 328 354 IPR000571 GO:0046872
Mupr10633g00002 745 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 333 353 IPR000571 GO:0046872
Mupr10633g00002 745 ProSiteProfiles Ankyrin repeat profile. 169 204 IPR002110 GO:0005515
Mupr10633g00002 745 FunFam Zinc finger CCCH domain-containing protein 66 286 354 - -
Mupr10633g00002 745 Gene3D - 329 391 - -
Mupr10633g00002 745 MobiDBLite consensus disorder prediction 1 31 - -
Mupr10633g00002 745 PANTHER UNKEMPT FAMILY MEMBER 94 707 IPR045234 -
Mupr10633g00002 745 Gene3D - 90 233 IPR036770 -
Mupr10633g00002 745 MobiDBLite consensus disorder prediction 423 445 - -
Mupr10633g00002 745 Pfam Ankyrin repeats (3 copies) 132 200 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10633g00002 Mupr-Chr10633 21122 24173 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10633g00002 87 740 C2H2 Transcription Factor Family AT5G12850 39.525 2.05e-143 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr10633g00002 Ank_2 1.3e-08 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10633g00002 - - gmx:100783376 1124.38