Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10623g00008 ATGGAGAAACTGAAACTATCTGCTAATTATGATCCTGATGCCAGCAGAGATCAGGCAGATTCATTTCCAATATTCAAACTGCAAGAGAGTCAAAATGTTGGACAGAAGATCAGTAGAAGAGAGGAAGAAGATACAAAAGCTGTAAGATTGGATGGAGGTTATGTAAGTGACCCCTCTAATTCTGCAAGCAATAGAGAATCTGTCAACAAGTGGATGGCATTTGCTAAGAAGCCTGGTTTCACAGTTGATGGTGACTCAGCAATAAAGGACAAAAGTATAACTGAAGACAATTACTTGAGGAATCATCTAAAAGAACCGTCGTCTTCTGGTCATCATATTTTAACTGAAGCAACTATAGCTGAGAGAACTGCTGAATGGGGTCTTGTGGTGAACTCAGGGAATTTCAAAGCAATGGAGGGAGAGAAAACAAGTGCTTCTTTTGATGTTGAGAGAAGCAGAAACTTGTCAGATAGATTTGTTGAATCAACACGAACGTCTGGGGAATCAAACTACGGACCTGAGTCAACATCAGGGGTGTTACCAAGGGTGTCACAAGAGTTGAAGGAAGCATTGGCAACGCTGCAACAGACATTTGTTGTCTCAGATGCAACCAAACCAGACTGCCCAATCATTCGATTTCTTCAGGGGCCTGATACAGACAAGATTGAAGTGGCGAAAATTAGGGATGCAATTAGAAATGGGAGAAGTTATTGTGGCAGACTTTTAAACTACAAGAAAGATGGAACTCCATTCTGGAATCTTCTCACTGTCACCCCCATCAAAGATGACCTTGGCAATACTATCAAATTCATTGGAATGCAGGTTGAGGTGAGCAAGTACACAGAAGGCGTGAATGAAAAGGCATTACGACCAAATGGATTACCTAAGTCATTAATTCGTTATGATGCTCGTCAAAAGGAGAGTGCTTTGGGTTCCATGGCTGAGGTTGTCCAAACTGTTAAGGACCCAAAATCCATTATCAGGGATAGGAGTGATGATACTGCCACCAAGAATGAAGAGCAAGAGAAATCCAATCTTGATTTTGTTTTGCCAAAGTCTGCTGATATTGGGAATACAAGCACACCTGGTAGACAAACTTCTCCACTGAACATCCAACGCATGAGTTCTAGTGATGATAAGATCAAGACATCACGATCAGGACGGATTTCTTTCAAGGGTTTTAAAGGGAGATCTCCGAGTTCTGCCGGGAGAAATGAGGAGAAGCCCATTGTTGAACCTGAGGTTTTGATGACCAAGGAAATAGAGTGGTCTAACAATTGGGAGCATTCACTCAGAGAGAGGGACATAAGGCAGGGTATTGATCTTGCAACCACATTGGAGCGGATAGAAAAGAACTTTGTGATTTCTGATCCTAGACTACCAGATAACCCAATTATATTTGCATCTGATAGCTTTCTTGAACTTACTGAATATACACGAGAAGAAATTTTGGGACGAAATTGTCGGTTTCTTCAAGGACCAGAAACAGATCAAACAACTGTTGCCAAGATAAGGGATGCTATTAGAGAACAGAGGGAAATCACTGTTCAATTGATCAACTATACTAAGAGTGGAAAGAAGTTCTGGAATTTGTTTCACTTGCAACCTATGCGTGACCAAAAGGGTGAACTTCAATACTTCATTGGTGTTCAACTAGATGGAAGTGATCATGTAGAGCCCTTAAAAAATCGCCTCTCTGAGACCACTGAGCTACAAAGTGCTAAGTTGGTGAAAGCCACCGCAGAAAATGTTGATGAAGCTGTTCGAGAACTTCCAGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCCCAACCTGTCTTTCCACGACCTCACAAAAAGGATAATCCTTCTTGGATAGCAATACAAAAGTTTTAG 1884 0.414 MEKLKLSANYDPDASRDQADSFPIFKLQESQNVGQKISRREEEDTKAVRLDGGYVSDPSNSASNRESVNKWMAFAKKPGFTVDGDSAIKDKSITEDNYLRNHLKEPSSSGHHILTEATIAERTAEWGLVVNSGNFKAMEGEKTSASFDVERSRNLSDRFVESTRTSGESNYGPESTSGVLPRVSQELKEALATLQQTFVVSDATKPDCPIIRFLQGPDTDKIEVAKIRDAIRNGRSYCGRLLNYKKDGTPFWNLLTVTPIKDDLGNTIKFIGMQVEVSKYTEGVNEKALRPNGLPKSLIRYDARQKESALGSMAEVVQTVKDPKSIIRDRSDDTATKNEEQEKSNLDFVLPKSADIGNTSTPGRQTSPLNIQRMSSSDDKIKTSRSGRISFKGFKGRSPSSAGRNEEKPIVEPEVLMTKEIEWSNNWEHSLRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQTTVAKIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLKNRLSETTELQSAKLVKATAENVDEAVRELPDANLRPEDLWAIHSQPVFPRPHKKDNPSWIAIQKF 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10623g00008 627 MobiDBLite consensus disorder prediction 324 346 - -
Mupr10623g00008 627 Gene3D PAS domain 428 591 - -
Mupr10623g00008 627 MobiDBLite consensus disorder prediction 1 20 - -
Mupr10623g00008 627 PANTHER PROTEIN TWIN LOV 1 92 211 - -
Mupr10623g00008 627 NCBIfam PAS domain S-box protein 464 555 IPR000014 -
Mupr10623g00008 627 MobiDBLite consensus disorder prediction 354 377 - -
Mupr10623g00008 627 FunFam LOV domain-containing protein 427 591 - -
Mupr10623g00008 627 Pfam PAS domain 461 553 IPR000014 -
Mupr10623g00008 627 Pfam PAS domain 212 278 IPR000014 -
Mupr10623g00008 627 CDD PAS 461 553 IPR000014 -
Mupr10623g00008 627 ProSiteProfiles PAC domain profile. 235 289 IPR000700 -
Mupr10623g00008 627 Gene3D PAS domain 211 346 - -
Mupr10623g00008 627 SMART pac_2 515 557 IPR001610 -
Mupr10623g00008 627 SMART pac_2 238 280 IPR001610 -
Mupr10623g00008 627 MobiDBLite consensus disorder prediction 324 409 - -
Mupr10623g00008 627 SUPERFAMILY PYP-like sensor domain (PAS domain) 211 274 IPR035965 -
Mupr10623g00008 627 MobiDBLite consensus disorder prediction 160 179 - -
Mupr10623g00008 627 ProSiteProfiles PAS repeat profile. 438 511 IPR000014 -
Mupr10623g00008 627 ProSiteProfiles PAC domain profile. 512 566 IPR000700 -
Mupr10623g00008 627 SUPERFAMILY PYP-like sensor domain (PAS domain) 457 553 IPR035965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10623g00008 Mupr-Chr10623 18793 35698 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10623g00008 117 627 AGC Kinase Gene Family AT5G58140 66.174 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10623g00008 K20715 - gmx:100820096 1068.53