Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10612g00001 ATGAAGCCGTCGTCGTTAGATCTCCGGTGCGTCCTTCGTCCCCCGCTCTCTGCTCTTAAATTCGTTTCGCGTCTGCGTTTGAAGAACCCCGAATCTGGAACGTTCCGTTCCGCGTTTGCGTTGGGATCAGTTGTTACCTTTGCTTCATTGGTTGCATTTATCTTTGATCATCTTTTTGAGCTATCTTATCATTTATTGAGACTGATGGTGGTGTGGTGCCAGTACATGAAGCGGAAGAGTGGAATGAATGAGAGTGAAGGAGAGTCCCAAGCACAAAAATGGAGTAACAGCCCTGGATTCACTAACATTAGTAATGTAACAAATAGTCCCTTCAAAACTCCTGTGTCTGCAAAAGGGGGAAGGACACATAAGGCAAAGGCTTCCAAAGAAGGCAGATCATGTCCTCCGACACCCATTTCAAATGCTGGTTCCCCTTCTCCTCTTACTCCTGCTAGCAACTGTCGTTATGACAGTTCCTTAGGTCTCTTGACAAAAAAGTTCATCAATTTGGTCAAGCATGCTGAGGATGGTATTCTTGACCTAAATAAAGCAGCAGAAACTTTGGAGGTGCAAAAGAGGAGGATATATGACATAACTAATGTTTTGGAAGGCATTGGTCTCATTGAAAAGAAGCTCAAGAACAGAATACATTGGAAGGGAATTGAATCTGCTACGACTGGTGAGGTGGATGGCGATATCTCTGTGCTTAAGGCAGAAGTTGAGAAACTTTCTTTGGAGGAGCAGGGATTAGATGATCAAATAAGGGAAATGCAAGAAAGGCTGAGGAATTTGAGTGAAAATGAGAATAATCAGAAGTGCCTTTTCGTGACTGAGGAAGATATTAAGGGCCTACCTTGCTTCCAGAATGAAACTCTAATAGCAATTAAAGCTCCGCATGGAACCACCCTGGAAGTCCCTGATCCTGTGGAAGCTGCTGACTATCCACAGAGGAGATATAGAATCATTCTTAGAAGCACAATGGGCCCCATTGACGTCTACCTTATCAGTCAATTTGAAGAGAAATTTGAAGAGATTAATGGTGCTGAGCTCCCCATGATCCCACTTGCTTCCAGTTCTGGTTCCAATGAGCAACTAATGACAGAAATGGTTCCTGCTGAATGCAGCGGAAAAGAACTTGAACCTCAAACTCAGTTCTCTTCTCATGCATACTCCGATCTAAATGCTTCACAAGAGTTTGGTGGTGGCATGATGAAGATTGTCCCTTCAGATGTTGATAATGATGCAGATTATTGGCTTCTATCAGATGCTGATGTTACTAGTGTTGATTGGAATGGGGTAGACATGCTTAATCCAGATTTTGGAATCATTTCGAGGCCTCAGACTCCATCTGGGTTTGCTGAAGCGCCACCAACAGGAGCAAACTCTAATCAGAAGTGA 1398 0.4363 MKPSSLDLRCVLRPPLSALKFVSRLRLKNPESGTFRSAFALGSVVTFASLVAFIFDHLFELSYHLLRLMVVWCQYMKRKSGMNESEGESQAQKWSNSPGFTNISNVTNSPFKTPVSAKGGRTHKAKASKEGRSCPPTPISNAGSPSPLTPASNCRYDSSLGLLTKKFINLVKHAEDGILDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKNRIHWKGIESATTGEVDGDISVLKAEVEKLSLEEQGLDDQIREMQERLRNLSENENNQKCLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPVEAADYPQRRYRIILRSTMGPIDVYLISQFEEKFEEINGAELPMIPLASSSGSNEQLMTEMVPAECSGKELEPQTQFSSHAYSDLNASQEFGGGMMKIVPSDVDNDADYWLLSDADVTSVDWNGVDMLNPDFGIISRPQTPSGFAEAPPTGANSNQK 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10612g00001 465 Pfam E2F/DP family winged-helix DNA-binding domain 157 220 IPR003316 GO:0005667|GO:0006355
Mupr10612g00001 465 MobiDBLite consensus disorder prediction 134 150 - -
Mupr10612g00001 465 Coils Coil 233 274 - -
Mupr10612g00001 465 SMART E2F_TDP_2 155 220 IPR003316 GO:0005667|GO:0006355
Mupr10612g00001 465 CDD E2F_DD 233 337 IPR032198 GO:0046983
Mupr10612g00001 465 Gene3D - 227 337 - -
Mupr10612g00001 465 FunFam E2F transcription factor 1 149 222 - -
Mupr10612g00001 465 SUPERFAMILY "Winged helix" DNA-binding domain 155 218 IPR036390 -
Mupr10612g00001 465 Gene3D - 149 222 IPR036388 -
Mupr10612g00001 465 MobiDBLite consensus disorder prediction 84 150 - -
Mupr10612g00001 465 SUPERFAMILY E2F-DP heterodimerization region 233 337 IPR037241 -
Mupr10612g00001 465 PANTHER TRANSCRIPTION FACTOR E2F 80 427 IPR015633 GO:0000978|GO:0006357
Mupr10612g00001 465 MobiDBLite consensus disorder prediction 85 115 - -
Mupr10612g00001 465 Pfam E2F transcription factor CC-MB domain 236 336 IPR032198 GO:0046983
Mupr10612g00001 465 MobiDBLite consensus disorder prediction 446 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10612g00001 Mupr-Chr10612 17037 20790 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10612g00001 69 465 E2F-DP Transcription Factor Family AT2G36010 57.385 2.12e-142 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Mupr10612g00001 E2F_CC-MB 1.5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10612g00001 K06620 - gmx:100811762 721.079