Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10611g00002 ATGGCCTCGGCTTCGTCTTCTACTTCCAAACTCTGCTTCAATTCGGACTGCAAGGAATTGAAGCCCGAAAGACCTAAGAAAGGTTGGAGACTCCGTAGCGGAGAACTAGCCGAGCTTTGTGATCGATGCGGCTCTGCTTTTGAAGAAGGGAGGTTCTGTGAGATTTATCACTCAAATGCTTCTGGTTGGAGGAGTTGTGAGACCTGTAGGAAGCGGATTCATTGTGGGTGTATTGTTTCAAGTAATGCCTTTGTGTTGTTGGATCCCGGAGGAATTGAATGTTTTGCATGTGCCCGCAAAAATATTATTTTGCCATCTAACCTGCCGTGGCCACAATCTTTTCCCCTTCAAAATCGTTTATCGGATAGACTTAGAGACATATCTACCAAAGGTTGGAGTCAGTTAGCTGGGTCAGGTCCTGTACCATGGAAGCAAGCACCCAGTCTGTTCAATTCTGCTTCTTCATCTGACCTGCTTCCAGACGTGCCTTCTTTAGTTGAATTATCCAATAGCTTTGACAAAATGTATTGCAATGAAAGGTTGCCTGCCTCAGCCTTGGAAAAGAAAAATGAGGATTTATCTGGAATATCAGTTAATTGGAACGTCAAGCTTGGCTCACGGGAGATGATGCTTATGAATGGAATGAGGAATGATGACAAATCAAGTTCATGTTTAAATATGTGTCAACAGCCTCCTTCTCTGAAGGAAGAGTCATCTCCTCAACCATTTGGTTTGCCTGTACCTAATTCATGCCAAAATGAAAGAAATGGTCAACTTGGGATAACTGGTAGTCATCCACAACAAACTCCACCACCTCCAGGAAAGCAATTTAATGGCACTATGCATTTAGCACCTGACTCATTAGGTGAGGCTCAGATTCGCAATGGACGGCCTCGAGCAGATGCCCGAGGAAGAAACCAGTTACTGCCACGATACTGGCCCAGGTGTACTGATCTGGAGCTACAGCAAATATCTATAGATTCAAATTCTGTAATTACTCCCCTGTTTCAAAAAACCTTGAGTGCTAGTGATGCTGGGCGAATTGGGCGTTTAGTGCTACCCAAAAAGTGTGCTGAGACCTACTTCCCACCAATTTCTCAGCCTGAAGGATTGCCACTTAAAATCCTTGATGCAAAAGGCAAGGAATGGATATTTCAATTTCGCTTCTGGCCCAACAATAACAGCAGAATGTATGTTTTAGAGGGTGTCACTCCATGCATACAGTCCATGCAGTTGCAGGCTGGTGACACTGTGACATTTAGCCGGTTGGAGCCAGAGGGGAGGTTGGTTATGGGGTTTAGAAAGGCTTCAAGTGCCGTGCCATCCGATCAGGACAATGAAACCAATAAGAATGGAAATGGATTTTCTGCACATGGTGAAGTTGAATTGGCTGATCCTAATTCGTGGTCTAAAGTTGATAAGTCAGGATACATAGCAAAAGAAGCACTGGGAAGCAAATCTTTAATCTCTAGAAAAAGAAAGAGCAGCATATTGGGTTCAAAGAGTAAACGTCTAAAAATTGAAAATGAAGATTTAATAGAGCTGAAGATTACATGGCAAGAAGCTCAAGGTCTGCTCCGCCCCCCTCCTAGCCATGTTCCAAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAATATGAGGAAGCTCCAGTGCTTGGGAAGCCAACAATCTTTACCAGTGATAATGTGGGTGAAAAGATCCAGTGGGCTCAATGTGAAGATTGTCTCAAGTGGCGCAAATTGCCAGCAAGTGCACTTCTTCCATCAAAATGGACATGTTCTGATAATTCGTGGGATCCAGAAAGATCTTCTTGTTCAGCTGTGCAAGAGCTGACAGCGGAGCAACTTGAGAATTTGCTACCTCCTTGTAATTCAGCTGTTTCCAAGAAAATGAAGGCTGCCAAGCAGGATCCTGATAATGCTGAAGCTTTGGAGGGACTTGATACCCTTGCAAATCTAGCTATCTTGGGAGAGGGTGAGGCACTCCCAGCATCCGCCCAGGCCACAACTAAACACCCACGTCATAGACCTGGCTGCTCTTGCATTGTTTGCATTCAGCCTCCCAGCGGAAAGGGCCCCAAGCATAAGCAGACATGCACATGTAATGTATGTTTAACAGTGAAGCGACGTTTCCGTACCCTTATGTTACGGCGTGAGAAGAAACAATCAGAAAAAGAAGCAGAGACAACTCGTAAAAAGCAACAGCAACCACATCCTCAACCATTACCTTCATCTGAAATTTTGCTTGATGAAGATTCCTTGCCCTGTAGTAATACATGTGATAGTAGCCCGAACCAGAATAAAGAGGGTAATGATGGTTCTGATGATGATCCTAACCGAATAAAATCAACTGCATCGCCATTCAAAGGGCAAATTGACCTCAATATCCAGCCAGAGCGAGAAGAAGAACTATCGCCTGGTTCAGATTCTGGCGGCATGATGAAGTTGCTCCATGATGCTACTGAGAGGTATCACAAGCAGCAGAATGTGAACTCTGGTACTGGAGATTCATCAGGCAGTCAGTCACAGCTGGTAGGAGATGGAATGAGGGAAGAGAAACTTAGCAATGGTGTTGTTACCCATGGCAGTAACAGTCATAATGCTGATAAGGAACATGTCCAATCTTTGTCTATGAATGTG 2643 0.4438 MASASSSTSKLCFNSDCKELKPERPKKGWRLRSGELAELCDRCGSAFEEGRFCEIYHSNASGWRSCETCRKRIHCGCIVSSNAFVLLDPGGIECFACARKNIILPSNLPWPQSFPLQNRLSDRLRDISTKGWSQLAGSGPVPWKQAPSLFNSASSSDLLPDVPSLVELSNSFDKMYCNERLPASALEKKNEDLSGISVNWNVKLGSREMMLMNGMRNDDKSSSCLNMCQQPPSLKEESSPQPFGLPVPNSCQNERNGQLGITGSHPQQTPPPPGKQFNGTMHLAPDSLGEAQIRNGRPRADARGRNQLLPRYWPRCTDLELQQISIDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAETYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRKASSAVPSDQDNETNKNGNGFSAHGEVELADPNSWSKVDKSGYIAKEALGSKSLISRKRKSSILGSKSKRLKIENEDLIELKITWQEAQGLLRPPPSHVPSIVVIEGFEFEEYEEAPVLGKPTIFTSDNVGEKIQWAQCEDCLKWRKLPASALLPSKWTCSDNSWDPERSSCSAVQELTAEQLENLLPPCNSAVSKKMKAAKQDPDNAEALEGLDTLANLAILGEGEALPASAQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFRTLMLRREKKQSEKEAETTRKKQQQPHPQPLPSSEILLDEDSLPCSNTCDSSPNQNKEGNDGSDDDPNRIKSTASPFKGQIDLNIQPEREEELSPGSDSGGMMKLLHDATERYHKQQNVNSGTGDSSGSQSQLVGDGMREEKLSNGVVTHGSNSHNADKEHVQSLSMNV 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10611g00002 881 MobiDBLite consensus disorder prediction 436 460 - -
Mupr10611g00002 881 MobiDBLite consensus disorder prediction 717 881 - -
Mupr10611g00002 881 MobiDBLite consensus disorder prediction 439 455 - -
Mupr10611g00002 881 CDD B3_DNA 334 435 IPR003340 GO:0003677
Mupr10611g00002 881 FunFam B3 domain-containing transcription repressor VAL1 314 441 - -
Mupr10611g00002 881 MobiDBLite consensus disorder prediction 752 770 - -
Mupr10611g00002 881 Gene3D - 568 621 - -
Mupr10611g00002 881 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 9 839 - -
Mupr10611g00002 881 MobiDBLite consensus disorder prediction 222 278 - -
Mupr10611g00002 881 SMART B3_2 336 437 IPR003340 GO:0003677
Mupr10611g00002 881 MobiDBLite consensus disorder prediction 718 734 - -
Mupr10611g00002 881 SUPERFAMILY DNA-binding pseudobarrel domain 333 435 IPR015300 -
Mupr10611g00002 881 Pfam B3 DNA binding domain 336 435 IPR003340 GO:0003677
Mupr10611g00002 881 ProSiteProfiles Zinc finger CW-type profile. 564 614 IPR011124 GO:0008270
Mupr10611g00002 881 MobiDBLite consensus disorder prediction 827 846 - -
Mupr10611g00002 881 ProSiteProfiles B3 DNA-binding domain profile. 336 437 IPR003340 GO:0003677
Mupr10611g00002 881 MobiDBLite consensus disorder prediction 858 881 - -
Mupr10611g00002 881 MobiDBLite consensus disorder prediction 222 265 - -
Mupr10611g00002 881 Pfam CW-type Zinc Finger 569 611 IPR011124 GO:0008270
Mupr10611g00002 881 Gene3D - 314 440 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10611g00002 Mupr-Chr10611 9132 21613 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10611g00002 9 737 B3 DNA Binding Superfamily AT2G30470 42.895 4.61e-169 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr10611g00002 B3 1.3e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10611g00002 K09287 - gmx:100807252 1664.82