Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10606g00002 ATGGGTTCGGTCGACTGTTATCCGTCGCATGGGGATGACGTGGCGGTGGTGTCTCTGGATTCGCTGCCTTTAGGGTTCCGATTCCGACCTACGGACGAGGAACTCATCGATTACTACCTAAGACAGAAGATCAACGGTAATGGTAGCGAGGTTTGGGTTATCCGAGAAATTGATGTCTGCAAATGGGAGCCTTGGGACATGCCTGATTTGTCGGTGATACGGAACAAGGATCCGGAGTGGTTCTTCTTCTGTCCACAGGACCGTAAGTATCCAAATGGGCATCGATTGAACAGAGCAACGAACTGTGGGTATTGGAAGGCAACGGGGAAGGATCGTAAAATCAAGTCTGCGATGAGCTTGATTGGAATGAAGAAGACTTTGGTCTTCTACACTGGTCGTGCACCCAAAGGGAAGAGGACCAATTGGGTTATGCACGAGTACCGCCCCACCTTGAAGGAGCTTGATGGTACCAATCCTGGACAGAACCCATATGTCCTTTGTCGCTTGTTTAAGAAAAACGATGAGAGCCTTGAAGTTTCGCACTGCGATGAAGCAGAGCAGACTGCTTCCACTCATATGGCTGCCAATTACTCTCCAAAAGAAACACAATCTGATCTGGCTCTTGTTGCAGCATCCCCGTCGCAGGTTACAGAAGATGATAAGCATCAAGCACCTATCCCTGCGATCTCTGAGGAAGCAATATCGAACATAATAACCCCGGTTGATTACCGCAGTGAGGGATATGATGCACAAAATCAAATTGCGGCACAGGCTGCAGAGGAGGTTCATCCATTGGACTATGACATATATTATGACCCAAAAAACGAGCTATTGGATGGTAAATTATTCTCCCCTGTACATGCACATATTCAACCAGAATTTCATTATCAACCAAACGTTGAATCAGATAGTCGATATGGGCTTCAATATGGTACCAATGAGACAAATATTTCAGAATTTTTGGATTCGATTGTTAACTGGGATCAATTCCCCTATGTGGAGCCCAATTGTCAACAACAGAACTTCCCCTCGTTTAATGTGGAGGATAACGTATTATGCAGTGGCATAGATGCTGAACTTGCCAATATGACATATATGCAAGCTTCTTATGTTGAGGGGGCAGTTGACAGAAGGATTCCTTTGGTGACAACACCAGAATTTTGCAGCATGACTGGCATCCCCATTGACCGTGGTATTGATGAGCAGAAGAGCAATGTTGGGTTATTTGTGAACAATTCCAATGATCATGTGCAACCAAGAATCTACAATACAGTTGCTAGTGGTGATACTGGAATCATAAGGAGGCATCGACAGTTACAAAGTGAACAGCTAAGCACAAACTCAGCACAAGGTACTGCACAGAGGAGAATTCGATTGTTAAAGGATGCTGATAGCTCAAATACGCTGGTGAAAAGTGGAAGTTGTGCACAAGAAGAGCTTAATTCAAAACCAATCATTGCTGTGAAGAAAGCTTCAGAAAACCCTGCTTCTGATGAAAGTGCTACTCTTACTAATGATGTGAATGAACTGCAGAAGACACCTGAGTCAACCGGCAATAGAAGGATTTCTCGACAAGTTACAAAAGCAGGTTCCACCTTGGGGTTAAAAGACCTTTTATTGCTCAGAAGGGTGCCTTACATTTCAAAGACTTCCTCCAATCGCACCATGTGCTCTTCTGTTTTTGTAGTTTCTGCCTTTGTAATGGTCTTGTTAGTGGTCTTTACTGACATAAGGGGATATGTTAAATTTTAA 1752 0.4412 MGSVDCYPSHGDDVAVVSLDSLPLGFRFRPTDEELIDYYLRQKINGNGSEVWVIREIDVCKWEPWDMPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATNCGYWKATGKDRKIKSAMSLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKNDESLEVSHCDEAEQTASTHMAANYSPKETQSDLALVAASPSQVTEDDKHQAPIPAISEEAISNIITPVDYRSEGYDAQNQIAAQAAEEVHPLDYDIYYDPKNELLDGKLFSPVHAHIQPEFHYQPNVESDSRYGLQYGTNETNISEFLDSIVNWDQFPYVEPNCQQQNFPSFNVEDNVLCSGIDAELANMTYMQASYVEGAVDRRIPLVTTPEFCSMTGIPIDRGIDEQKSNVGLFVNNSNDHVQPRIYNTVASGDTGIIRRHRQLQSEQLSTNSAQGTAQRRIRLLKDADSSNTLVKSGSCAQEELNSKPIIAVKKASENPASDESATLTNDVNELQKTPESTGNRRISRQVTKAGSTLGLKDLLLLRRVPYISKTSSNRTMCSSVFVVSAFVMVLLVVFTDIRGYVKF 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10606g00002 583 Pfam No apical meristem (NAM) protein 23 148 IPR003441 GO:0003677|GO:0006355
Mupr10606g00002 583 SUPERFAMILY NAC domain 18 172 IPR036093 GO:0003677|GO:0006355
Mupr10606g00002 583 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 21 227 - -
Mupr10606g00002 583 Gene3D NAC domain 31 176 IPR036093 GO:0003677|GO:0006355
Mupr10606g00002 583 MobiDBLite consensus disorder prediction 491 521 - -
Mupr10606g00002 583 ProSiteProfiles NAC domain profile. 22 172 IPR003441 GO:0003677|GO:0006355
Mupr10606g00002 583 MobiDBLite consensus disorder prediction 495 521 - -
Mupr10606g00002 583 FunFam Nac domain-containing protein 86 31 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10606g00002 Mupr-Chr10606 9429 12325 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10606g00002 14 503 NAC Transcription Factor Family AT4G35580 42.692 4.75e-97 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr10606g00002 NAM 1.2e-35 No_clan