Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1058g00009 ATGTTGTGTGCTTGTTCCGGGGAGCAATTCAAATTTGAAGAGGCACCACAGTCACCGGAGTCCTTGGCAACAAGGGATTTCTCTGCAAGTGGCCTTTCTTCTAGGACTGGGGATTGGGAATCCAAATTTGATGAAACACAAGTGGAAGACGTTGAATCTACTCTAAAAGAAGCTCTCTCATTAAATTATGAGGTTGGAATTAATGAAGCTCGGGCTTTGCTGGGGAGGCTTGAATATCAAAGAGGGAACTTTGATGCTGCCCTTCAAGTGTTTGAGGGTATAGACATAAGGGCTTTGGCCCCAAGGATGATCAGGGCCATAGCTGAAAGAACCAAGCAAAGAAAACCACGGTCCAAGGTGGATAATGTGCTTCCTAATGTGATGTCAATGCATTCAGTAAGCCTGCTTCTTGAGGCAATTTTGCTTAAATCCAAATCCTTAGAAGAACTTGGGCGATACACCGAGGCTGCAAAGGAGTGCAGAATTATTGTGGATACAGTTGAATCTGCTCTTCCTAATGGAATGCCTGAGTGCATTAGTGAAGATTGTAAGTTGAAAGAAATATTCCACAAAGCATTGGAGTTGCTTCCAAATCTATGGATCAAAGCAGGTTTGCTAGATGAAGCTGTCACTGCTTATCGGCGAGCTCTAGTCAAGCCTTGGAATTTGGAGCCGCGGAGGTTGGCCTATGTACAGAAAGATTTGGCTACCACACTACTCTATGGTGGTGTTGAAGTAAACCTACCCTCACAGTTGCAAGTAAAGGGTCTAACAACAACACCTCTGAGTGGCACTGAAGAAGCAATACTTTTGTTGTTAGTACTCTCAGGAAAGATGGCACTTCAGGAAATAGACTGGGATCCTGAAATCATGGAACATCTTTCATTTTCACTTTCAATTACTGGGATGTTTGAATTATTGGCAGATAATGTAGAGAAGATCCTTCCAGGTGTTTATGATCGAGCCGAGAGGTGGTACTTTCTTGCTCTTTGTTACAGTGCAGCAGGACACAATGAAGTAGCCTTGAACCTTTTGAGGAAGGCTTGTGGTAGTTCTGAAGCAAAGCATAGACCCCATTTTCCTTCATTTTTGTTTGGTGCAAAGCTGTGTTCTCTACATCCAAACCATACTCATGAAGGCATTAAATTTGCACAGGAAGTTATTGATCTAGCCAAGCATAAAAATGAGCATTTTTTAGGTCTGGGCCAAAACTTTCTTGGCATTTGCCATGGGGCTGCTGCTAGAATATCTGTACTGGATTCTGAGAGAATTATATTTCAAAGGGAGTCTTTGAACTTTCTAAATGCTGCTGCTGCTCTAACTGGAAATAATGACCCAGAAGTGATATTCAGCCTTGGATTGGAAAATGCAATTCAAAGAAATCTAAATGCAGCTTATGACAATATAATGATGTACTCAGACATGGTAGCTAGCAGCTCAAAAAGAGGTTGGCAGCTGTTAGCACTTGTAGTGTCAGCACAGCAGCAGTTTAAGGACGCGGAAACCATAGTTGATTTTGCTTTAGATGAGTCTGGCGGGATAGATCAGTTAGAACTACTAAGACTCAAAGCTGTACTTCAAATTACTCAGCAGCAACCCAAGAAAGCAATAGAGACCTACAGAATCTTGCTAGCAGTAATTGAAGCAAGAAGAGAGAATTGGCTTCAAGCTAAGACATTCAGGCATGAGGCACTATCAGAACAGAAGTTGGAAATGGAAGCCTGGCAGGATTTGGCTACCATTTATGCAGATCTTAGTTCCTTTCTTGATGCAAAAGCATGTGTTGACAAAGCTCAGTTGATAGAGATATTTTCTCCTAGAAGTTGGCATATTACTGGGTTGTTGTTTGAAGCTCAATCATTGCATAAGGAGGCCTTTGTTTCCTTCTCAGTTTCATTGTCAATAGAACCGGATTACATTCCCAGTATCATTTCAACTGCAAAACTGTTGCTTAAACTTGGCATGCAATCACTTCCAATTGCAAGAAGCTTTTTAATGAATGCTTTGAGATTAGACCCCACAAACCATGATGCATGGTTTAACCTTGGATTGGTTTTAAAAATGGAAGGTTCATCGCAACAAGCAGCAGATTGCTTTCAAGCCGCATGTGAGATGAAGCTGTCAGCTCCAGTGCAAAAATTTGAGTGA 2148 0.4176 MLCACSGEQFKFEEAPQSPESLATRDFSASGLSSRTGDWESKFDETQVEDVESTLKEALSLNYEVGINEARALLGRLEYQRGNFDAALQVFEGIDIRALAPRMIRAIAERTKQRKPRSKVDNVLPNVMSMHSVSLLLEAILLKSKSLEELGRYTEAAKECRIIVDTVESALPNGMPECISEDCKLKEIFHKALELLPNLWIKAGLLDEAVTAYRRALVKPWNLEPRRLAYVQKDLATTLLYGGVEVNLPSQLQVKGLTTTPLSGTEEAILLLLVLSGKMALQEIDWDPEIMEHLSFSLSITGMFELLADNVEKILPGVYDRAERWYFLALCYSAAGHNEVALNLLRKACGSSEAKHRPHFPSFLFGAKLCSLHPNHTHEGIKFAQEVIDLAKHKNEHFLGLGQNFLGICHGAAARISVLDSERIIFQRESLNFLNAAAALTGNNDPEVIFSLGLENAIQRNLNAAYDNIMMYSDMVASSSKRGWQLLALVVSAQQQFKDAETIVDFALDESGGIDQLELLRLKAVLQITQQQPKKAIETYRILLAVIEARRENWLQAKTFRHEALSEQKLEMEAWQDLATIYADLSSFLDAKACVDKAQLIEIFSPRSWHITGLLFEAQSLHKEAFVSFSVSLSIEPDYIPSIISTAKLLLKLGMQSLPIARSFLMNALRLDPTNHDAWFNLGLVLKMEGSSQQAADCFQAACEMKLSAPVQKFE 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1058g00009 715 SMART tpr_5 517 550 IPR019734 GO:0005515
Mupr1058g00009 715 SMART tpr_5 572 605 IPR019734 GO:0005515
Mupr1058g00009 715 SMART tpr_5 190 223 IPR019734 GO:0005515
Mupr1058g00009 715 SMART tpr_5 676 709 IPR019734 GO:0005515
Mupr1058g00009 715 SMART tpr_5 606 639 IPR019734 GO:0005515
Mupr1058g00009 715 SMART tpr_5 322 355 IPR019734 GO:0005515
Mupr1058g00009 715 SUPERFAMILY TPR-like 558 706 IPR011990 GO:0005515
Mupr1058g00009 715 SUPERFAMILY TPR-like 71 355 IPR011990 GO:0005515
Mupr1058g00009 715 PANTHER PROTEIN NPG1 1 715 IPR043376 -
Mupr1058g00009 715 Gene3D Tetratricopeptide repeat domain 545 710 IPR011990 GO:0005515
Mupr1058g00009 715 Gene3D Tetratricopeptide repeat domain 22 248 IPR011990 GO:0005515
Mupr1058g00009 715 SUPERFAMILY TPR-like 321 599 IPR011990 GO:0005515
Mupr1058g00009 715 Gene3D Tetratricopeptide repeat domain 266 544 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1058g00009 Mupr-Chr1058 35192 39289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1058g00009 1 714 Calmodulin-binding Proteins AT1G27460 58.635 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1058g00009 K21843 - gmx:100799086 1247.26