Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1058g00001 ATGTTTAATTTTCAGAAAATTTGTCTTCTATTGACAGTGTTGTTTCTTGTAGGGAAGCCTGTTGTAAGCAAGAATGGGTGCAGGGACAAGTGTGGACGCGTTCATATTCAATTTCCATTTTACCTCAGAAACAGCAATTTGAGTCACACCACCAGCTATCCCCCTGGGTTCGAGCTGTTTTGTAACGATAAATATGAGACTGTGCTGAAGCTGCCTCATGTTCCATTTATATTATTTGTCAAAAGAATAGATTACAAATCACGGCTAATCCATATCTACGACCCTAAAAACTGCCTTTCCGAGGTTTTCTTAAAACTCGGCAATTCCTCTGTTTATCCATTCGTGTTCCATCCATTCGTGTTCCATCCATTGGTTTATTATTCCCAGACGAAGCATGATATTTCCTTCTTCCGTTGCAATTCAATGTCGTGCCCGATTGCGAAACAATCTGACCAGGGTTTTATTGATCCTGAAATTAGATCATGCATCAAGGTGGCAGATGTTTTGTCGGTCGAGTGGTATGTGTATAAAGATGACGGTGACCCGATAAACTCTATTATGGAATGGCCCGAACACAATTGTAGTCACTGTGAAGCACAAGGCCAGAAATGTAAATGGAAGATTAATGGTACCCAAGGTGAAACTGAATGTTCCATTTGCCAAATAAACACCATTCCAACATTAACTATTATATATATTGCTGCAGGGGGAATCGTTGGTTTGACTCTTTTGCTGCTACTGGTCAAGGCTTTGTTTCATGTGTATGGATATTATAAGATGAAAGAAGAAGACGAGACTCGGATAGAGAAATTCTTGGAGGACTACAGGGCAATGAAACCTACAAGATTCACTTATGCTGACATTAAGAGAATTACAAATGGGTTTAGTGAAAGGCTAGGGGAAGGAGCTCATGGAGAAGTGTTCAAAGGAATGCTATCCCGAGAAATTCTCGTTGCTGTGAAGATACTAATGAACGATACAGTGGGAGATGATGGGAAGGACTTCATAAATGAAGTGGGAACCATTGGAAAAATCCATCACGTTAATGTTGTTCGCTTGCTTGGATTCTGTGCGGATGGGTTCCACCGTGCTCTTGTCTATGATTTCTTCCCCAATGGTTCTCTTGATAAATTCTTAGCTCCACCGGACAAGAAGGATGTTTTCCTCGGTTGGGAAAAGTTGCAACAAATTGCTCTTGGTGTTGCCAAAGGGATTGAGTATCTCCATCTTGGTTGCGATCACAGAATACTTCACTTCGACATCAATCCCCACAATGTTTTAATACACGACGATTTCACCCCGAAAATCACTGATTTTGGACTTGCCAAGTTGTGTCCTAAAAATCAAAGCACGGTGTCTATGACTGCAGCCAGGGGAACCTTGGGCTACATAGCCCCTGAAGTTTTCTCAAGGAACTTCGGTAACGTGTCTTACAAGTCTGACATTTACAGCTATGGAATGTTGCTGCTAGAGATGGTGGTAGGAAGAAAGAATACGAATATGTCAACGGAGGAATGTTTTCAAGTTCTATACCCTGAATGGATCCATAATTTGCTTGAAGGCAGAGACGTTCAAGTTACTATTGAGGACGAGGGAGATGTTCAAATTGCAAAGAAACTTGCAATTGTAGGACTTTGGTGCATTCAGTGGAATCCTGTGGACCGTCCTTCCATGAAAACTGTGGTACAAATGCTTAAAGAAGAGGGAGACGAGTTAATTGCGCCCCCTACTCCTTTTGACATCACCCCTTCTTCTAGACCAAACATCCTTGTTCCAGCAAGACGTCAGAATTTCGAGTTGGAAATAAGAATTTAA 1815 0.4149 MFNFQKICLLLTVLFLVGKPVVSKNGCRDKCGRVHIQFPFYLRNSNLSHTTSYPPGFELFCNDKYETVLKLPHVPFILFVKRIDYKSRLIHIYDPKNCLSEVFLKLGNSSVYPFVFHPFVFHPLVYYSQTKHDISFFRCNSMSCPIAKQSDQGFIDPEIRSCIKVADVLSVEWYVYKDDGDPINSIMEWPEHNCSHCEAQGQKCKWKINGTQGETECSICQINTIPTLTIIYIAAGGIVGLTLLLLLVKALFHVYGYYKMKEEDETRIEKFLEDYRAMKPTRFTYADIKRITNGFSERLGEGAHGEVFKGMLSREILVAVKILMNDTVGDDGKDFINEVGTIGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLDKFLAPPDKKDVFLGWEKLQQIALGVAKGIEYLHLGCDHRILHFDINPHNVLIHDDFTPKITDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVVGRKNTNMSTEECFQVLYPEWIHNLLEGRDVQVTIEDEGDVQIAKKLAIVGLWCIQWNPVDRPSMKTVVQMLKEEGDELIAPPTPFDITPSSRPNILVPARRQNFELEIRI 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1058g00001 604 ProSiteProfiles Protein kinase domain profile. 293 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1058g00001 604 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Mupr1058g00001 604 SUPERFAMILY Protein kinase-like (PK-like) 273 565 IPR011009 -
Mupr1058g00001 604 PANTHER RUST RESISTANCE KINASE LR10-RELATED 264 582 IPR045874 GO:0004672
Mupr1058g00001 604 Gene3D Phosphorylase Kinase; domain 1 266 369 - -
Mupr1058g00001 604 Pfam Protein kinase domain 296 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1058g00001 604 Gene3D Transferase(Phosphotransferase) domain 1 370 573 - -
Mupr1058g00001 604 FunFam PR5-like receptor kinase 370 575 - -
Mupr1058g00001 604 Pfam Wall-associated receptor kinase galacturonan-binding 27 94 IPR025287 GO:0030247
Mupr1058g00001 604 FunFam serine/threonine-protein kinase PBS1-like 259 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1058g00001 Mupr-Chr1058 11807 15256 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1058g00001 232 578 Receptor kinase-like Gene Family AT1G66910 44.633 4.37e-96 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mupr1058g00001 Pkinase 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1058g00001 - - gmx:102669457 934.095