Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10588g00002 ATGTATTACGATGGGAAGCATGTATTTCATGTTGGATCGTCAAACAATAACCAAGTGTGCAATTCATCCTCAGTTCAGGCATATCCAAGCAGCGCGTGTGACCATGATAATTTATCCTTCTACAAAATAGAGGACGAAGAGAACAAAAGAGGTTACGAGTATGAAAAATGGATGTCTTCAAATGAAAGGTTTACGAGAAAAACGATGAGCCCACCCAGAAGCAACAAAGCATTCAATATTATTAGGGTTTGTGCGGATTGTAACACAACCACTACCCCACTCTGGAGGAGTGGTCCTAATGGCCCTAAGTCACTTTGCAATGCGTGCGGCATTAGACAGAGGAAGGCAAGAAGGGCAATGGCAGAAACTGCGAATGGTGTTGGCCCTTCCATGGATGCATCTTCTTCCACAAAGACCAGAGTGCATGACAAGGAAAAGAAGTGTCGTACAAACCATTTTGCACGGTTCAAGAATAAATGCAAAGCCACTACAACCACTACTGCTGCCGGAAAATCTCAGCAGGAGGAAGTGAAGATTGATTTCAAGGATTTTGCTATAATTTTGAAATTGAGGGATAAAAATTCGGCTTTCCGGCAAGTGTTTCCAATGGATGAAGTAGCTGAGGCGGCGCTGCTTCTCATGGATTTATCTAGTGCCTTTGTTCAATTTTAA 672 0.4271 MYYDGKHVFHVGSSNNNQVCNSSSVQAYPSSACDHDNLSFYKIEDEENKRGYEYEKWMSSNERFTRKTMSPPRSNKAFNIIRVCADCNTTTTPLWRSGPNGPKSLCNACGIRQRKARRAMAETANGVGPSMDASSSTKTRVHDKEKKCRTNHFARFKNKCKATTTTTAAGKSQQEEVKIDFKDFAIILKLRDKNSAFRQVFPMDEVAEAALLLMDLSSAFVQF 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10588g00002 223 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 78 118 - -
Mupr10588g00002 223 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 71 222 - -
Mupr10588g00002 223 ProSitePatterns GATA-type zinc finger domain. 84 109 IPR000679 GO:0006355|GO:0043565
Mupr10588g00002 223 CDD ZnF_GATA 83 120 IPR000679 GO:0006355|GO:0043565
Mupr10588g00002 223 Pfam GATA zinc finger 84 117 IPR000679 GO:0006355|GO:0043565
Mupr10588g00002 223 Gene3D - 81 152 IPR013088 GO:0006355|GO:0008270
Mupr10588g00002 223 SMART GATA_3 78 129 IPR000679 GO:0006355|GO:0043565
Mupr10588g00002 223 MobiDBLite consensus disorder prediction 123 144 - -
Mupr10588g00002 223 ProSiteProfiles GATA-type zinc finger domain profile. 82 114 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10588g00002 Mupr-Chr10588 16094 17957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10588g00002 80 222 C2C2-Gata Transcription Factor Family AT4G26150 38.994 3.81e-25 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr10588g00002 GATA 3e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10588g00002 - - gmx:102659929 273.478