Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10584g00001 ATGGGCGCCGACATGTCCAACAATCAACCTCCCACTTCTCATGCCAAAGACTTCTTTGCATCTCCAGCTCTCTCTCTCAGCCTCGCTGGGATTTTTCGCCATGCTGGGGTGGCGCCGGCGCCTCACGCTGCCACTTCTAACATGGAGGTGGAGGAGGGGGAAGAAGGCAGCGGAGGAGGTGAGAGGTTAGAGGAGATTAGTAGCGAGAACTCGGGTCCCACAAGATCCAGATCAGAAGATGATTTCGAAGGAGAAGGTGAACATGACGATGATGATGGTGACGGGGACAAGAACAAGAAGAAAAAGAGGAAGAAGTATCACAGGCACACTGCTGAGCAGATCAGAGAAATGGAAGCGCTTTTCAAAGAGTCACCTCATCCTGATGAAAAGCAGAGGCAACAACTAAGCAAGCAATTAGGCCTTGCCCCAAGGCAAGTCAAGTTTTGGTTCCAAAATCGTCGAACCCAAATTAAGGCAATACAAGAGCGTCATGAAAATTCTTTGTTGAAGTCAGAAATAGAGAAACTGAAGGAGAAAAATAAGAGCTTTCGAGAGACCATAAACAAAGCTTGTTGCCCCAACTGTGGCGTGCATACCACAAGCAGAGATAGTGCCATGCCAACCGAAGAACAACAGCTACGAATTGAAAATGCCAAACTCAAAGCTGAGGTAGAGAAGCTCCGAGCAGCTTTAGGGAAATACGCACCAGGGACAACGTCCCCTTCGTGTTCTTCTGGTCATGACCAAGAGAATAGAAGCTCTTTGGATTTTTATACTGGAATTTTTGGACTTGATAAGTCAAGGATAATGGATATAGTAAACCAAGCAATGGAGGAGCTCATTAAGATGGCTACCATGGGGGAACCATTATGGCTTCGTAGCTTCGAGACCGGTCGCGAAATACTTAACTATGATGAATATATGAAGGAGTTTGCAGTTGAAAATTCAAGCACTGGTGGAAGGCCAAAGAGATCCATCGAAGCCTCAAGAGACACTGGAGTTGTTTTCGTGGATCTCCCTCGGCTTGTGCAAAGTTTTCTAGACGTGAATCAATGGAAGGAAATGTTTCCGTGTTTGATATCTAAGGCGGCAACTGTTGATGTTATATGCAATGGAGAAGGTCCAAACAGGAATGGTGCAGTGCAACTGATGTTTGCTGAGCTGCAAATGCTCACGCCAATGGTGCCCACCAGAGAAGTCTATTTTGTCCGTTACTCCAAACAGTTGAGTGCTGAACAGTGGGCAATCGTCGATGTATCCATAGACAAAGTAGAAGACAACATTGACGCGTCCCTCGTGAAATGCAGAAAACGCCCTTCCGGTTGCATTATTGAGGACAAGTCCAATGGCCATTGCAAAGTAATCTGGGTGGAGCACTTGGAATGCCAGAAGAGTGCAGTTCATTCAATGTATCGCACCATAGTGAACAGTGGCCTAGCCTTTGGGGCAAGGCATTGGGTTGCGACAGTACAACTTCAGTGCGAACGTCTGGTTTTCTTCATGGCAACAAACGTTCCCATGAAGGATTCAACCGGTGTTGCGACGTTGGCCGGGAGAAAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGAATTTCTGCCATTCAATTGGCGCGTCAAGCTTCCACACATGGACCAAGGTTACAAGTAAAACTGGGGAAGACGTAAGGATAAGTTCTAGAAAGAACTTGAATGATCCTGGCGAACCTCTTGGGTTGATATTGTGTGCAGTTTGTTCTGTATGGTTGCCTGTCTCACCTAATGTTCTTTTCGATTTCTTGAGGGATGAAACACGCCGAACCGAGTGGGATATCATGTCAAGTGGCGGGACAGTGCAGTCAATTGCAAATTTAGCAAAAGGACAAGACCGAGGCAATGTCGTAACCATTCAAACAATTAAATCGAATGAAAACAGTGTGTGGATACTGCAAGATAGCTCCACAAACCCTTATGAGTCAATGGTGGTATATGCTTCTGTGGACATTACTGGTATTCAGTCTGTGATGACAGGATGTGATTCAAGCAATCTTGCCATTCTGCCCTCTGGATTCTCTATTATTCCTGATGGCCTCGAGTCAAGGCCATTGGTGATTACTTCAAGGCAGGAAGAAAAAAATACGGAGGGAGGATCTTTGTTTACAATGGCATTTCAGATCCTTACCAATGCTTCTCCCACTGCCAAGTTAACTATGGAGTCTGTGGACTCGGTCAACACTCTTGTATCATGTACATTGAGAAATATCAGAACAAGTTTACAATGCGAAGATGATTTTAATTCTGTCTTATGTGGTTGGTTTGAAGGCTCAGATTGCGAACTATCGACTAATTAA 2331 0.453 MGADMSNNQPPTSHAKDFFASPALSLSLAGIFRHAGVAPAPHAATSNMEVEEGEEGSGGGERLEEISSENSGPTRSRSEDDFEGEGEHDDDDGDGDKNKKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKSEIEKLKEKNKSFRETINKACCPNCGVHTTSRDSAMPTEEQQLRIENAKLKAEVEKLRAALGKYAPGTTSPSCSSGHDQENRSSLDFYTGIFGLDKSRIMDIVNQAMEELIKMATMGEPLWLRSFETGREILNYDEYMKEFAVENSSTGGRPKRSIEASRDTGVVFVDLPRLVQSFLDVNQWKEMFPCLISKAATVDVICNGEGPNRNGAVQLMFAELQMLTPMVPTREVYFVRYSKQLSAEQWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSAVHSMYRTIVNSGLAFGARHWVATVQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTWNFCHSIGASSFHTWTKVTSKTGEDVRISSRKNLNDPGEPLGLILCAVCSVWLPVSPNVLFDFLRDETRRTEWDIMSSGGTVQSIANLAKGQDRGNVVTIQTIKSNENSVWILQDSSTNPYESMVVYASVDITGIQSVMTGCDSSNLAILPSGFSIIPDGLESRPLVITSRQEEKNTEGGSLFTMAFQILTNASPTAKLTMESVDSVNTLVSCTLRNIRTSLQCEDDFNSVLCGWFEGSDCELSTN 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10584g00001 776 SUPERFAMILY Bet v1-like 264 496 - -
Mupr10584g00001 776 Pfam START domain 273 496 IPR002913 GO:0008289
Mupr10584g00001 776 FunFam Homeobox-leucine zipper protein HDG1 87 176 - -
Mupr10584g00001 776 MobiDBLite consensus disorder prediction 40 112 - -
Mupr10584g00001 776 Gene3D - 90 173 - -
Mupr10584g00001 776 Coils Coil 210 230 - -
Mupr10584g00001 776 FunFam Homeobox-leucine zipper protein GLABRA 2 271 495 - -
Mupr10584g00001 776 SUPERFAMILY Bet v1-like 518 720 - -
Mupr10584g00001 776 Gene3D - 319 491 IPR023393 -
Mupr10584g00001 776 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 99 752 IPR042160 -
Mupr10584g00001 776 CDD homeodomain 107 158 IPR001356 GO:0003677
Mupr10584g00001 776 ProSiteProfiles START domain profile. 262 499 IPR002913 GO:0008289
Mupr10584g00001 776 SMART START_1 271 496 IPR002913 GO:0008289
Mupr10584g00001 776 Coils Coil 159 186 - -
Mupr10584g00001 776 CDD START_ArGLABRA2_like 266 495 - -
Mupr10584g00001 776 SMART HOX_1 102 164 IPR001356 GO:0003677
Mupr10584g00001 776 ProSitePatterns 'Homeobox' domain signature. 135 158 IPR017970 GO:0000981|GO:0006355
Mupr10584g00001 776 ProSiteProfiles 'Homeobox' domain profile. 100 160 IPR001356 GO:0003677
Mupr10584g00001 776 Pfam Homeodomain 103 158 IPR001356 GO:0003677
Mupr10584g00001 776 SUPERFAMILY Homeodomain-like 91 161 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10584g00001 Mupr-Chr10584 15915 21958 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10584g00001 66 756 Homeobox Transcription Factor Family AT1G79840 67.330 0.0 935
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr10584g00001 START 2.2e-56 CL0209