Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10580g00001 ATGGGTCTCTGCTTCTCCTCTAGCCCCACACCTCACTCTTCTTCCTTCAACCCCCCTCAGTACTCAGGCAAGTCTTCAACATCCAACCAAAACATGACACGTTCGGAGAGTACCGACAGCAAGAACGTGGGGTTCTCGGGAACGACGAGCAGCGGCGGGGGGAAGAGCCAATTCTCAGAGATAGCGAGTGGGAGCATCGACGGCGAAGGCTCTCTTCCACTTCCTCTTTCTCTTTCTCTTTCTCTTCCTCTTCCTCTTCCTCTTCCTTCCCCTGATGGCCAGATTCTGGAACGACCCAACTTGAAGGTCTTCAGCTTCGCAGACCTCAAATCTGCCACAAAGGGGTTCAAGTCCGACACATTGCTCGGCGAAGGTGGCTTTGGCAAAGTTTACAAAGGCTGGTTGGATGAGAAGACCCTCACCCCTGCCAGAGCAGGCTCTGGAATGGTCGTTGCCATCAAAAAGTTGAACTCCGAAAGCGTCCAAGGCTTTCAAGAGTGGCAGTCAGAAGTAAACTTTTTGGGAAGGCTTTCTCACGCGAACCTGGTCAAGTTATTGGGTTACTGTTGGGACGATGATGAGCTTCTTCTTGTGTATGAATTCATGCCAAAGGGAAGCTTGGAGAATCATCTCTTCAGAAGAAATCCTAATATAGAACCACTTTCATGGAACACCCGACTTAAAATAGCTATTGGTGCAGCTCGGGGATTAGCTTTCTTACATACCTCTGAAAAGAAAATTATATATAGAGATTTCAAGGCCTCAAATATACTTCTTGATGGGAATTACAATGCAAAAATCTCAGACTTTGGCTTGGCTAAATTGGGACCTTCTGGGGGACAATCACATGTAACTACCAGGGTTATGGGCACATATGGTTATGCTGCTCCAGAATATATTGCAACAGGGCACTTGTATGTGAATAGTGATGTGTACGGGTTTGGTGTAGTGCTGCTTGAAATACTGACAGGCATGCGGGCACTTGACACAAAACGACCAACAGCCCAGCTGAACCTGGTTGAGTGGACTAAGCCTCTTCTTTCCTCAAAAAAAAAGTTGAAAACCATTATGGATGTTAAGATAGAGGGTCAATATTCACCCAAGGCAGCATTCCAAGCAGCACAACTTACACTAAAATGCATACAACATGACCCTAAACAACGTCCTTCTATGAAAGAGGTACTTGAGGAATTGGAAGCCATTCAAGCTATCCCTAAAAAATCCAAAACCCGCAATTCTCACCGTACTTCTCATCAACCTCCTCGGTAG 1269 0.4641 MGLCFSSSPTPHSSSFNPPQYSGKSSTSNQNMTRSESTDSKNVGFSGTTSSGGGKSQFSEIASGSIDGEGSLPLPLSLSLSLPLPLPLPSPDGQILERPNLKVFSFADLKSATKGFKSDTLLGEGGFGKVYKGWLDEKTLTPARAGSGMVVAIKKLNSESVQGFQEWQSEVNFLGRLSHANLVKLLGYCWDDDELLLVYEFMPKGSLENHLFRRNPNIEPLSWNTRLKIAIGAARGLAFLHTSEKKIIYRDFKASNILLDGNYNAKISDFGLAKLGPSGGQSHVTTRVMGTYGYAAPEYIATGHLYVNSDVYGFGVVLLEILTGMRALDTKRPTAQLNLVEWTKPLLSSKKKLKTIMDVKIEGQYSPKAAFQAAQLTLKCIQHDPKQRPSMKEVLEELEAIQAIPKKSKTRNSHRTSHQPPR 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10580g00001 422 Pfam Protein tyrosine and serine/threonine kinase 119 398 IPR001245 GO:0004672|GO:0006468
Mupr10580g00001 422 Gene3D Phosphorylase Kinase; domain 1 100 201 - -
Mupr10580g00001 422 FunFam Serine/threonine-protein kinase BIK1 88 201 - -
Mupr10580g00001 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Mupr10580g00001 422 ProSitePatterns Protein kinases ATP-binding region signature. 122 155 IPR017441 GO:0005524
Mupr10580g00001 422 CDD STKc_IRAK 122 401 - -
Mupr10580g00001 422 ProSiteProfiles Protein kinase domain profile. 116 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10580g00001 422 Gene3D Transferase(Phosphotransferase) domain 1 202 419 - -
Mupr10580g00001 422 MobiDBLite consensus disorder prediction 403 422 - -
Mupr10580g00001 422 MobiDBLite consensus disorder prediction 1 64 - -
Mupr10580g00001 422 FunFam Serine/threonine-protein kinase PBS1 202 418 - -
Mupr10580g00001 422 PANTHER OS01G0588500 PROTEIN-RELATED 35 402 - -
Mupr10580g00001 422 SUPERFAMILY Protein kinase-like (PK-like) 95 400 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10580g00001 Mupr-Chr10580 4752 8775 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10580g00001 92 408 Glycoside Hydrolase AT3G07070 48.742 4.33e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mupr10580g00001 PK_Tyr_Ser-Thr 4.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10580g00001 - - gmx:100794193 634.024