Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1057g00001 ATGAAGAGACTTGGCAGCTCCGATTCTCTGGGTGCTCTCATCACGATTTGTCCACCAACAGAGGAACAGAGTCCGAGGAAGAACAGGCACGTGTATGGCAGGGAGTTTCAGTCGATGCTGGAAGGACTAGACGAAGAAGGGTGCGTGGAAGAAGCAGGACAGCACGCTGAGAAGAAACGAAGACTGAGCGTGGATCAGGTGAAGGCGTTGGAGAAGAACTTCGAGGTAGAGAACAAGCTCGAACCTGACCGAAAGGTTAAACTGGCACACGAGCTTGGCTTGCAGCCAAGACAAGTAGCTGTTTGGTTCCAAAACCGCCGAGCCAGATGGAAAACTAAACAATTGGAAAGAGATTATGGTGTTCTCAAATCCAATTACGAAACGCTTAAACTCAGCTACGACACCCTCCAACAAGACAACCAAGCCTTACTCAAAGAGATTAAGGAATTAAAATCCAGGGTGGAGGGGGAGAACACCGAGAGCGATGCTTCGGTGAAGGAGGAGATGACGACGGTGCAGGATAGTGACCCGCTTTGTGAAACCGCCATTCCTGGATCCGATTCAAAGGTGAAAGACGGGTCTTCAGACAGTGACTCTAGCGCGATCTTGAATGATGAAAACAACAATAACGCGGCGATATCTTCGTGTGGGATTCTACAGAGTGATGAGGGGCTTGTGTCGTCGCCTTCGTGCTTCCAGTACCAGAAACAGTACCAGACGCAGTACGTGAAGATGGAGGAGCACAATTTCCTGAGCGCGGACGAGGCCTGCAATTTCTTCTCGGACGAACAACCCCCCACGCTTCAGTGGTACTGTTCAGAGGAGTGGGGTTAA 834 0.5048 MKRLGSSDSLGALITICPPTEEQSPRKNRHVYGREFQSMLEGLDEEGCVEEAGQHAEKKRRLSVDQVKALEKNFEVENKLEPDRKVKLAHELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKSNYETLKLSYDTLQQDNQALLKEIKELKSRVEGENTESDASVKEEMTTVQDSDPLCETAIPGSDSKVKDGSSDSDSSAILNDENNNNAAISSCGILQSDEGLVSSPSCFQYQKQYQTQYVKMEEHNFLSADEACNFFSDEQPPTLQWYCSEEWG 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1057g00001 277 Pfam Homeobox associated leucine zipper 113 154 IPR003106 GO:0006355|GO:0043565
Mupr1057g00001 277 ProSiteProfiles 'Homeobox' domain profile. 53 113 IPR001356 GO:0003677
Mupr1057g00001 277 Pfam Homeodomain 58 111 IPR001356 GO:0003677
Mupr1057g00001 277 Gene3D - 52 120 - -
Mupr1057g00001 277 PRINTS Lambda-repressor HTH signature 84 93 IPR000047 GO:0003677
Mupr1057g00001 277 PRINTS Lambda-repressor HTH signature 93 109 IPR000047 GO:0003677
Mupr1057g00001 277 Coils Coil 126 160 - -
Mupr1057g00001 277 CDD homeodomain 58 114 IPR001356 GO:0003677
Mupr1057g00001 277 SUPERFAMILY Homeodomain-like 43 115 IPR009057 -
Mupr1057g00001 277 MobiDBLite consensus disorder prediction 154 206 - -
Mupr1057g00001 277 MobiDBLite consensus disorder prediction 154 169 - -
Mupr1057g00001 277 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 49 271 IPR045224 GO:0003700
Mupr1057g00001 277 SMART HOX_1 56 117 IPR001356 GO:0003677
Mupr1057g00001 277 ProSitePatterns 'Homeobox' domain signature. 88 111 IPR017970 GO:0000981|GO:0006355
Mupr1057g00001 277 FunFam Homeobox-leucine zipper protein HAT5 51 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1057g00001 Mupr-Chr1057 11473 12643 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1057g00001 1 276 Homeobox Transcription Factor Family AT4G40060 49.684 1.27e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr1057g00001 Homeodomain 2.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1057g00001 K09338 - gmx:100796213 422.55