Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10572g00001 ATGAATAGAGGTGTCTTGCAAAGCTCACCGGTGCAACAAATGATGGCCGGAAACCCTAACAACTGGTGGAACATCAACACCATGCGCCCTCCTCCTCCTCCTTCTCAAGCTTCTCCTCCTTTCTTCTCCACTCCTTCCAACTTTTTAACTCCATATACCCCTTCTTCTTCTCTTCCTCTTCCTTCATGGCATGACAACAATCAAGAGCTACCTGAGTCATGGAGCCAGCTACTCATGAGTGGGATGGTGTCTGAAGAAGAGAAGGTAAACATGTGCCAGGTTCAGTCAAAGAAGTTGGAGAACTGGGAGGAACAAATGCTAAGTCAGGCTCCAAGTGCTCCTATTGTTGATGTTAAGCGAGAAAGCTCGGTGAACAGCTATGTATATGGGCATGGAAACGAAGAGTTTCAAGCAGCAAAGCCAACTTGGTCTCAAATAGTGCCTGCTTCTTCCCCAAAATCCTGTGTAACAAGTTTCAGCAGCAGCATGTTGGATTTCTCTAACAATAACACCGATGCGAGGCCTCCTCCACCAGATCCATCCTCAGAGTGCAATAGCACTGCGGCTGGTGGGGCATTCAAGAAAGCTAGGGTTCAACCGTCCACAACTCAGTCGACCTTCAAGGTTAGGAAAGAGAAGTTAGGTGACAGAATTACATCCCTTCACCAACTCGTTTCCCCATTCGGAAAGACTGACACGGCGTCTGTCTTATTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCATACTTGGGGAGTGGATCAGGAAACATGAGGCATCAACAATCTGTAAGAAATAATATCAACCCATTTCTGGTTCAGAGAGAGAAGAATTGTATATTCCCTGAAGACCCTGGTCAGTTGCTGAATGAAAACTGTCTGAAGAGGAAAGCAGCTAGTGAACAGGATTCTCAAGAAGAAACAAAGAAGGACCTGAGGAGTAGAGGGTTGTGTCTGGTTCCAGTTTCATGCACGCTGCAAGTTGGAAGTGACAATGGAGCTGACTATTGGGCTCCTGCTTTTGGAGGGGGATTTCGTAGTTAA 1068 0.4625 MNRGVLQSSPVQQMMAGNPNNWWNINTMRPPPPPSQASPPFFSTPSNFLTPYTPSSSLPLPSWHDNNQELPESWSQLLMSGMVSEEEKVNMCQVQSKKLENWEEQMLSQAPSAPIVDVKRESSVNSYVYGHGNEEFQAAKPTWSQIVPASSPKSCVTSFSSSMLDFSNNNTDARPPPPDPSSECNSTAAGGAFKKARVQPSTTQSTFKVRKEKLGDRITSLHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSGSGNMRHQQSVRNNINPFLVQREKNCIFPEDPGQLLNENCLKRKAASEQDSQEETKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGFRS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10572g00001 355 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 198 247 IPR011598 GO:0046983
Mupr10572g00001 355 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 208 258 IPR036638 GO:0046983
Mupr10572g00001 355 FunFam transcription factor bHLH68 isoform X1 205 258 - -
Mupr10572g00001 355 MobiDBLite consensus disorder prediction 166 188 - -
Mupr10572g00001 355 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 77 336 - -
Mupr10572g00001 355 CDD bHLH_AtbHLH_like 206 255 IPR045239 -
Mupr10572g00001 355 Gene3D - 204 258 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10572g00001 Mupr-Chr10572 4368 7986 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10572g00001 1 296 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 45.232 2.22e-70 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10572g00001 - - gmx:100785156 613.609