Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10564g00010 ATGGCTCCGCAAGACACTCAACACCATCCACAAAACGACCACGTCATTCCGATCGAGAAACGAAAGAGGGACGACGATGACGACCGTTCGCTCCATCCCATGTGGAAGACGAGCCTCTGTTCCTACTTCCGGAGCCACAATGGTTCCTGCAGTCACAGCGACGCGTGTCGATACGCCCACGGCGAGGAGGAGCTCCGCCTTCGCCTCGACAACCGGTGGGATCCGACTTTCGAGCGAGCGAAGAAGTACTTGAAATCCGAGACGGGTGAAAAGCACGCCGTCGTCGAAATGCTTGGTGCATTTGCCGCGAAAATGGTGGTCCGAGAATTTGAGGAGTTTTCTCAACCACGAGGACGAAGAACAAATGAAGAGTTCATCAACGGGTTTAGAAGGAAAATCAATTGGCAACAAGAAAATAAAGGCAAAGTGACAGTAGGCTTCATGCTTGGAAACTTCAAGGAAGGTGTAACAGTAGTCGAGGAAGCAATGGATTGCCCAAACGTAATTAACTTGTTGCACAATAAACTCAGTGGAAATGTTCCCTCGTGGTTTGGAATTGGATCCATGTCACAGCTTACTAAGTTACTTCTTGGTGCCAACGATCTAGTTGGTACTACCCCACATTCCTTGGGAAATCTTTCAAGCCTCCAAAATGTGACACTTGCAAGAAATCATTTGGAAGGAAGTATACCCGATGCTTTGGGTCGGTTATCAAATTTGAAAGAGTTGAATCTTGGTTTAAATAATTTGTCAGTAGTCCCTGTTTCTCTTTACAACCTTTTAAATATTCAAATTTTTGTTCTTGGGGAAAACCAGTTATCTGGTACTCTTCCATCAAATATGCATCTTGCTTTCCCAAATCTTCGAGTATTCTTTGTTGGATGGAACAACTTCTATGGAATTTTCCCATCTTCAATACCCAACATTACCGGATTGCAAGCGCTTGATATCTCTTTAAATGGTTTTAGTGGATCAATTCCTCCCACTTTAGGAAGCTTAAACAAACTTACGAGGTTTAGCATTGCTTATAATAGTTTTGGAAGTGGGAGAGCTCAGGATTTGGATTTCCTTTCCTCATTAAGCAATTGTACTCAATTGCGCATACTTCTTGTGGGCAACAATGAATTTGGTGGTGTGTTGCCAGATCTTATTGGCAATTTTTCTACCCATCTCACTTGA 1179 0.4377 MAPQDTQHHPQNDHVIPIEKRKRDDDDDRSLHPMWKTSLCSYFRSHNGSCSHSDACRYAHGEEELRLRLDNRWDPTFERAKKYLKSETGEKHAVVEMLGAFAAKMVVREFEEFSQPRGRRTNEEFINGFRRKINWQQENKGKVTVGFMLGNFKEGVTVVEEAMDCPNVINLLHNKLSGNVPSWFGIGSMSQLTKLLLGANDLVGTTPHSLGNLSSLQNVTLARNHLEGSIPDALGRLSNLKELNLGLNNLSVVPVSLYNLLNIQIFVLGENQLSGTLPSNMHLAFPNLRVFFVGWNNFYGIFPSSIPNITGLQALDISLNGFSGSIPPTLGSLNKLTRFSIAYNSFGSGRAQDLDFLSSLSNCTQLRILLVGNNEFGGVLPDLIGNFSTHLT 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10564g00010 392 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 35 62 IPR000571 GO:0046872
Mupr10564g00010 392 MobiDBLite consensus disorder prediction 12 30 - -
Mupr10564g00010 392 Gene3D Ribonuclease Inhibitor 285 392 IPR032675 -
Mupr10564g00010 392 SMART c3hfinal6 34 62 IPR000571 GO:0046872
Mupr10564g00010 392 SUPERFAMILY L domain-like 167 388 - -
Mupr10564g00010 392 ProSiteProfiles Zinc finger C3H1-type profile. 34 63 IPR000571 GO:0046872
Mupr10564g00010 392 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 165 253 - -
Mupr10564g00010 392 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 168 281 - -
Mupr10564g00010 392 FunFam Lrr receptor-like serinethreonine-protein kinase gso2 283 364 - -
Mupr10564g00010 392 Gene3D - 28 67 - -
Mupr10564g00010 392 Gene3D Ribonuclease Inhibitor 134 284 IPR032675 -
Mupr10564g00010 392 MobiDBLite consensus disorder prediction 1 30 - -
Mupr10564g00010 392 SUPERFAMILY CCCH zinc finger 32 67 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10564g00010 Mupr-Chr10564 42589 44321 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10564g00010 164 392 Receptor kinase-like Gene Family AT3G47570 40.517 6.53e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr10564g00010 zf-CCCH 1.7e-05 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10564g00010 - - gmx:100777490 345.895