Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10561g00008 ATGAAGGCTCCTCCAAATGGATACTTGCCTAATTCTGGCGAAGGGGAAAGGAAGACCATCAATTCAGAGTTATGGCATGCTTGTGCTGGACCATTGGTCTCTTTACCTCCTGTTGGAAGTCTTGTAGTTTACTTCCCTCAAGGACACAGTGAGCAAGTTGCAGCATCCATGCAAAAGGAGGCTGACTTCATACCCAGCTACCCTAACCTTCCATCCAAGTTGATTTGCATGCTTCACAATGTTGCCCTGCACGCTGATACTGAAACTGACGAGGTCTATGCACAGATGACCCTTCAACCTGTAAATAAATATGACAAGGAAGCAATATTGGCATCAGACATGGGTCTCAAACAGAACCAACAACCTACTGAGTTCTTTTGCAAAACTCTTACAGCTAGTGACACAAGCACTCATGGTGGATTTTCTGTGCCTCGTAGAGCAGCTGAGAAAATATTCCCACCTCTGGATTTTTCAATGCAACCTCCAGCTCAGGAGATTGTTGCCAAAGATTTGCATGACAATACATGGACATTTAGACATATTTACCGCGGACAACCAAAGAGGCATCTACTGACGACTGGTTGGAGTGTCTTTGTTAGCACCAAAAGGCTGTTTGCTGGAGATTCAGTTCTTTTTATCAGAGATGAAAAACAACAACTTCTATTAGGTATAAAAAGAGCTAATAGACAGCAGCCAGCACTATCTTCATCAGTAATATCCAGTGACAGCATGCATATTGGCATTCTTGCTGCTGCAGCTCATGCTGCTTCAAATAATAGTCCATTTACTATATTTTATAATCCAAGGGCCAGCCCTTCTGAATTTGTAATTCCATTGGCCAAGTATAATAAGGCTCTGTACAATCAAGTTTCCCTTGGAATGAGATTCAGAATGATGTTTGAGACTGAGGAATCAGGGGTACGCAGATATATGGGTACAATCACTGGGATCAGTGACTTGGATCCTGCCAGATGGAAGAACTCACAGTGGCGCAATCTTCAGGTTGGATGGGATGAATCAACGGCTGGGGAGCGCCCAAGCAGAGTTTCAATTTGGGATATTGAACCAGTAGTGACACCTTTCTACATTTGTCCTCCTCCATTTTTTAGGCCCAAGTTCCCCAAGCAACCAGGAATGCCAGATGATGAGTCTGATATAGAAAATGCTTTCAAGAGAGCTATGCCCTGGCTTGGAGACGACCTTGGCATGAAGGATGCCTCAAGTTCAATCTTCCCTGGTTTGAGTTTGGTGCAATGGATGAGCATGCAGCAAAATAATCAGTTCTCAGCTCCCCCATCTGGATTTGTACCCCCATCCATGCTTTCATCCAATACAATGCATGGTAACCTCAACACTGATGATCCATCCAAATTATTGAGCTTTCAAGCTCCTGCCCTCTCTGCACCAAGTCTTCAATTTAACAAACCTAATCTACCAAACCAAGTCAACCAAATGCAACAATCCCCAACATCATGGCCTCCACAGCAGCAACAACAGCAGAAGCTGCAGCCAATGCTGCAAACACCATTAAACCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGAGGCAACAGCAGCTTCCTGGACCACAAAACCTGCCACAACCACAGCAACAACAACCCCAAATGCCTCAACAGAGAGCGCAACAGCCACAACAACAGCAACAGCAGTCGTGTCAACAGACCATCATGAATAACGGCCTTAACGGGGCAGTTGCTTCTAACCAGATTCCAAATCAGTGTGTACAGCAACCAGTAACCTATTCGCAGCTTCAGCAACAGCAATTGCTCTCAGGAAGTATCCCACCCCAACAAAGTTTTCAATCTCCCAATAAGAATACATTGCTAATGACATCCTTACCACAAGACTCACAGTTTCAGCAACAAATAGACCAGCAAGCTAGTCTCTTGCAGAGGCAGCAGCAGCAGCAGCAACAGACACAGTTGCAACCATCTCCATTGCACTTATTGCAACAAAGCTTGTCACAGAGGGCACCGCAGCAACCACAAATGACTCAAATGTCACAGCAGAACAGTTCAGAGCAACAGCCACAGTTACAGTTGCTACAGAAGTTGCAACAGCAGCAACTGCAACAGCAGCAACAGCAACAGCAACTCCTTACCACTTCTAGCCCACTTTTGCAGTCTCAGCTTCTACAGCAACAAAACACTCATCAACAAAACCAGCAATTACTGCAGCTGCCTCTATCACAATGTCATCAGTCTCAACAGCTTGGCAACAATGCTTTCTCAATGGAGAAGCTTATCAACGGCAACAACTACTCTTCTTCGGCTCTGATGCAAACGCAGCAGCTCCCTGTGAACCAACCCCATAATACACAGAAATCACTAACTAATACTAGAGCTCCCTCTACTCTTACAGATGGAGATGCTCCATCATGCTCAACTTCACCATCTACTAATAACTGCCAGATATCCCCTCCAAACTTGATGAAAAGAAATCAACAAGTACCAGCCACATTAGGAGGACCTTCAGTAGTTGAACCCACCAATCATCTGATACAGGAGCTTCAGAGTAAGTCTGAGATGCAGATCAAACACGAATTACCCGGTGTAAGAGGACCTGACCAGCTCAAGTATAAAGGGGCAATTGCTGATCAGCTGGAAGCTTCTTCTGGAACATCTTACTGTATTGATCCTAATAATATCCACCAGAACTTCCAAATTCCCAACTTCTGCATAGATGGGGATGTCCAATCACACCCAAGAAATAATCTTCCATTTGCCTCTAATCTTGATGGATTAACACCTGATACTTTGCTGTCAAGAGGGTATGATTCTCAAAAAGATCTTCAGAACTTACTGTCCAATTATGGTGGTGCTCCAAGAGACATTGAAACTGAGCTGTCCACTGCTGCCATTAGTTCGCAGCCATTTGGGGTGCCAGACATGCCTTTTAAGCCCGGATGCTCTAGTGATATTGCCATGAATGATACTGGGGTTTTGAATAATGGCTTGTGGGCTAATCAGACTCAACGAATGCGAACTTATACTAAGGTTCAAAAATGTGGCTCTGTTGGAAGATGTATCGATGTCACCCGTTACAAGGGATATGACGAACTCCGGCATGATTTGGCTCGGATGTTTGGGATTGAAGGGCAGCTAGAAGATCCTCAAAGGACTGAGTGGAAACTAGTATACGTGGATCATGAAAACGACATTCTTCTTGTTGGCGATGACCCTTGGGAAGAATTTGTAAGCTGTGTCCAGAGCATAAAGATATTGTCATCTGCTGAGGTACAGCAAATGAGCTTGGATGGGGATTTAGGTCATGTTCCAGTCCCCAATCAAGCATGTAGTGGCACAGATAATGGCAATGCATGGAGGGGACAGTATGATGATAACTCTGCAGCCTCCTTTAATCGATAA 3390 0.4484 MKAPPNGYLPNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICMLHNVALHADTETDEVYAQMTLQPVNKYDKEAILASDMGLKQNQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKALYNQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPARWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTPFYICPPPFFRPKFPKQPGMPDDESDIENAFKRAMPWLGDDLGMKDASSSIFPGLSLVQWMSMQQNNQFSAPPSGFVPPSMLSSNTMHGNLNTDDPSKLLSFQAPALSAPSLQFNKPNLPNQVNQMQQSPTSWPPQQQQQQKLQPMLQTPLNQLQQQQQQQQQRQQQLPGPQNLPQPQQQQPQMPQQRAQQPQQQQQQSCQQTIMNNGLNGAVASNQIPNQCVQQPVTYSQLQQQQLLSGSIPPQQSFQSPNKNTLLMTSLPQDSQFQQQIDQQASLLQRQQQQQQQTQLQPSPLHLLQQSLSQRAPQQPQMTQMSQQNSSEQQPQLQLLQKLQQQQLQQQQQQQQLLTTSSPLLQSQLLQQQNTHQQNQQLLQLPLSQCHQSQQLGNNAFSMEKLINGNNYSSSALMQTQQLPVNQPHNTQKSLTNTRAPSTLTDGDAPSCSTSPSTNNCQISPPNLMKRNQQVPATLGGPSVVEPTNHLIQELQSKSEMQIKHELPGVRGPDQLKYKGAIADQLEASSGTSYCIDPNNIHQNFQIPNFCIDGDVQSHPRNNLPFASNLDGLTPDTLLSRGYDSQKDLQNLLSNYGGAPRDIETELSTAAISSQPFGVPDMPFKPGCSSDIAMNDTGVLNNGLWANQTQRMRTYTKVQKCGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGHVPVPNQACSGTDNGNAWRGQYDDNSAASFNR 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10561g00008 1129 MobiDBLite consensus disorder prediction 428 457 - -
Mupr10561g00008 1129 FunFam Auxin response factor 997 1091 - -
Mupr10561g00008 1129 FunFam Auxin response factor 289 361 - -
Mupr10561g00008 1129 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 682 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr10561g00008 1129 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr10561g00008 1129 Gene3D - 289 360 - -
Mupr10561g00008 1129 CDD B3_DNA 125 217 IPR003340 GO:0003677
Mupr10561g00008 1129 ProSiteProfiles PB1 domain profile. 1002 1095 IPR000270 GO:0005515
Mupr10561g00008 1129 SMART B3_2 126 228 IPR003340 GO:0003677
Mupr10561g00008 1129 Gene3D - 997 1091 - -
Mupr10561g00008 1129 FunFam Auxin response factor 124 228 - -
Mupr10561g00008 1129 SUPERFAMILY DNA-binding pseudobarrel domain 116 255 IPR015300 -
Mupr10561g00008 1129 SUPERFAMILY CAD & PB1 domains 1016 1080 - -
Mupr10561g00008 1129 Gene3D - 123 227 IPR015300 -
Mupr10561g00008 1129 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Mupr10561g00008 1129 MobiDBLite consensus disorder prediction 662 686 - -
Mupr10561g00008 1129 Pfam AUX/IAA family 999 1088 IPR033389 -
Mupr10561g00008 1129 MobiDBLite consensus disorder prediction 470 560 - -
Mupr10561g00008 1129 MobiDBLite consensus disorder prediction 1107 1129 - -
Mupr10561g00008 1129 MobiDBLite consensus disorder prediction 775 815 - -
Mupr10561g00008 1129 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10561g00008 Mupr-Chr10561 36380 43865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10561g00008 1 488 B3 DNA Binding Superfamily AT1G19220 83.197 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr10561g00008 AUX_IAA 2.4e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10561g00008 K14486 - gmx:100804628 934.48