Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10559g00001 ATGGAAGGGATAATGGCGACTAAAGTTACAATGGCTCTTTTGTTCACTTTTGTTGCTATCATTCCATGTCTTGAGGCCGGCATTGGTGAGTATGATGATTTCCTCAAAGCTCAAGCTAACCAAGCACACAGAATAGCTCTCTCTGCTTATGTCTCATCCCCTGAAGAGGTCACCCAAGAAATTAATCTCCACGTTAATCTGTACGACATCTCTTCTCTTGTACTTTACTTAATCTTTTCGTGTACATATATGTTGGCATGGGAGAACAGTACAGCCATGAGGAGAGAACTAAAAGAGAAGAAAATGAATGGAAGAGATGGATGTGAGGCCACAAACCCCATCGACACATGTTGGAGGTGCAACAAAGACTGGGCCAACGACCGTTACAAGTTAGCCAAATGCAGTAAAGGATTTGGAAGACGGACCACTGGCGGGCTCGGTGGGCCCATCTATGTTGTCACTGATAACTCGGACGATGATTTGGTGAACCCCAAGGAAGGAACTCTTCGTTTTGCCGTCGTCCAACAGGGTCCCTTGTGGATTATCTTCGAGCGCAGTATGGTGATTGAGTTGAAGCAGGAGTTGTTGATTTCTTCTGACAAGACCATCGACGGCCGTGGAGCCAACGTGCAGATCAAAAACGGCGCTGGCATCACCATGCAGTTTGTGAATAACGTTATTATTCACGGAATTCGTATAAAGAACATTGTGGCCAAGGAAGGCGGCACGATAAGGGACTCCTTCAACCACACCGGGTTTAGAACAAAGAGCGACGGCGATGCCATCTCTGTTTTTGGAGCCTCCAACATCTGGATTGATCATGTTTCCCTCTCTAACTCCGAAGATGGTCTTATTGATATTATCCAAGGCTCCACTGCCATCACCATCTCAAATTGTCACATGACTAAACATAACGATGTGATGTTGTTTGGAGCCAACGACGCCTTCGACGGTGACAAGATTATGCAGATAACAGTGGCCTTCAACCATTTCGGACAAGGACTGATTCAGAGGATGCCTAGGTGCAGATTTGGATTCGTACACGTCCTCAACAACGATTATACACACTGGATCATGTATGCCATTGGTGGAAGCGCTGCACCAACTATTCTTAGCCAGGGAAACCGGTTCATCGCTCCCAACAATGATGCTGCAAAAGAAATTACCCACAGAGTGTATGCAGAGCCTTCAGTCTGGAAGAACTGGCAATGGCAATCGGAGATGGATCTGTTCATGAACGGTGCCAAGTTCGTTCCTTCAGGAGCTCCCATCCAATTGGACTACAAGAAGGGTCTCATAATGAAGCCCAGAGATGGAACTCATGTCAGCAGACTAACAAAACATGCCGGTGCCCTCGACTGCACTGTTGGCAAACCTTTCACTCGTGCC 1389 0.468 MEGIMATKVTMALLFTFVAIIPCLEAGIGEYDDFLKAQANQAHRIALSAYVSSPEEVTQEINLHVNLYDISSLVLYLIFSCTYMLAWENSTAMRRELKEKKMNGRDGCEATNPIDTCWRCNKDWANDRYKLAKCSKGFGRRTTGGLGGPIYVVTDNSDDDLVNPKEGTLRFAVVQQGPLWIIFERSMVIELKQELLISSDKTIDGRGANVQIKNGAGITMQFVNNVIIHGIRIKNIVAKEGGTIRDSFNHTGFRTKSDGDAISVFGASNIWIDHVSLSNSEDGLIDIIQGSTAITISNCHMTKHNDVMLFGANDAFDGDKIMQITVAFNHFGQGLIQRMPRCRFGFVHVLNNDYTHWIMYAIGGSAAPTILSQGNRFIAPNNDAAKEITHRVYAEPSVWKNWQWQSEMDLFMNGAKFVPSGAPIQLDYKKGLIMKPRDGTHVSRLTKHAGALDCTVGKPFTRA 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10559g00001 463 Gene3D - 111 453 IPR012334 -
Mupr10559g00001 463 SMART amb_all 186 383 IPR002022 -
Mupr10559g00001 463 PRINTS Pollen allergen Amb family signature 338 357 IPR018082 -
Mupr10559g00001 463 PRINTS Pollen allergen Amb family signature 402 426 IPR018082 -
Mupr10559g00001 463 PRINTS Pollen allergen Amb family signature 194 210 IPR018082 -
Mupr10559g00001 463 PRINTS Pollen allergen Amb family signature 158 183 IPR018082 -
Mupr10559g00001 463 PRINTS Pollen allergen Amb family signature 360 379 IPR018082 -
Mupr10559g00001 463 PRINTS Pollen allergen Amb family signature 134 151 IPR018082 -
Mupr10559g00001 463 PRINTS Pollen allergen Amb family signature 258 279 IPR018082 -
Mupr10559g00001 463 PRINTS Pollen allergen Amb family signature 431 454 IPR018082 -
Mupr10559g00001 463 PANTHER PECTATE LYASE 18-RELATED 44 458 IPR045032 GO:0030570
Mupr10559g00001 463 Pfam Pectate lyase 193 377 IPR002022 -
Mupr10559g00001 463 SUPERFAMILY Pectin lyase-like 112 451 IPR011050 -
Mupr10559g00001 463 Pfam Pectate lyase, N terminus 28 67 IPR007524 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10559g00001 Mupr-Chr10559 4406 5973 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10559g00001 13 458 Polysaccharide Lyase AT5G15110 52.891 3.40e-172 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10559g00001 K01728 - gmx:100810615 709.523