Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10554g00001 ATGTCTAGAGCATTGGAACAGGCAGAGAACCCGTCAGAGGACGGTAAAAGTAAAAGCTCATCACTGAACTTGAAGGAGACAGAGCTGAGGCTTGGCCTCCCTGGTTGTGAGTCTCCAGAGAGAATATGTCTTTTTGGCAAGGAGTTGCAGAACAAGCATAATGTTTGTTCAGTTGCAAGTCCTTTCAAGGCTGGGGCTAAGAGGGGCTTCTCTGATGCTATTGACACCTCTTCTGGATCTCAACTTGATGCTTTGTTCTCTCCTAGAGGCCTCAAACCTCTTATTGCTTTAGACTCTCAAACTAACACCCAACAGGGTAATACCATCATCGTCAAAGAGGTTTCTGTACTTCAGGAAAACAATAATCAGGTTTCTGCAACTAATGCCCATGCCACTGCTCCTGCTTCAAAGGCACAGGTCGTGGGATGGCCTCCAATTCGATCTTTCCGAAAGAACACGATGGCCTCTAATTTGACAAAGAACAATGATGAAGCTGAGGGAAAAGTAGGGTTTGGTTGTCTCTATGTAAAAGTCAGTATGGATGGTGCCCCTTATCTTAGAAAGGTTGATCTCAAAACCTATAACAACTACATGGAACTTTCTTCAGCTCTTGAGAAGATGTTCACCTGCTTTACCATTGGTCAATGCAATTCTCCTGGACTTCCTGGGAAAGATGGACTGAGTGAGAGCTCTTTGAGGGATCTTCTCCATGGATCTGAATATGTTCTTACATATGAAGATAAAGATGGAGACTGGATGCTTGTGGGTGATGTTCCTTGGGAGATGTTCACTGATACATGTCGGAGACTAAGGATCATGAAAGGCTCTGAGGCAATTGGGCTAGCATTCATTTACGTGTACAGTACTTTCCGGATTAAAGGTTCAACTCTAGGTTCTTCTGAGGAAGTTCTCCAAGAGCCATGGAAAAATCTAGGAGCCAAAACTAATGCAGAAAAACCCGTATTAACCATATCTCTTTGGCTTATATTGGAAGTCCCCAAAATAAAGAGGAAATTTGCAAGTTGTGCTGTTTGCGATGTGTTTAAAGAGTAA 1053 0.4321 MSRALEQAENPSEDGKSKSSSLNLKETELRLGLPGCESPERICLFGKELQNKHNVCSVASPFKAGAKRGFSDAIDTSSGSQLDALFSPRGLKPLIALDSQTNTQQGNTIIVKEVSVLQENNNQVSATNAHATAPASKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKVGFGCLYVKVSMDGAPYLRKVDLKTYNNYMELSSALEKMFTCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGLAFIYVYSTFRIKGSTLGSSEEVLQEPWKNLGAKTNAEKPVLTISLWLILEVPKIKRKFASCAVCDVFKE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10554g00001 350 MobiDBLite consensus disorder prediction 9 23 - -
Mupr10554g00001 350 Gene3D - 169 287 - -
Mupr10554g00001 350 Pfam AUX/IAA family 26 282 IPR033389 -
Mupr10554g00001 350 FunFam Auxin-responsive protein 168 285 - -
Mupr10554g00001 350 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 22 280 IPR003311 GO:0005634|GO:0006355
Mupr10554g00001 350 MobiDBLite consensus disorder prediction 1 23 - -
Mupr10554g00001 350 SUPERFAMILY CAD & PB1 domains 173 274 - -
Mupr10554g00001 350 ProSiteProfiles PB1 domain profile. 173 275 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10554g00001 Mupr-Chr10554 11842 14351 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10554g00001 175 278 B3 DNA Binding Superfamily AT1G19850 33.962 2.21e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr10554g00001 AUX_IAA 4.7e-89 CL0072