Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10553g00001 ATGACGACCAAAGTTACAATGATTCTTCTGTTCACTTTTACTGCTATGTTCACTTTTACTGCTATGTTTCATGTCTTGCTGGCATTGCTAAACAAACCCACAATAGCTCTCATTGCATATGTCTCGTCCCCTAAAGAGGTCACCGAAGATCTTAATCTGGCGTTAATTTGTACGTGTCTCTTCTCTTGTACTTTACTTACTCTTTTCGTGGCATGGGAGAACAGTACAGCCATGAGGAGAGAACTAAAGGAGAAGAAAATGAATGGAAGAGATGGATGTGAGGCCTCAAACCCCATTGACACATGTTGGAGACTGGACCAACGACCGTTACAAGTTGGCCAAGTGCAGAGTAAAGGATTTGGAAGACGGCCACCGGCGGGCTCGGTGGACCCATCTATGTTGTCACTGGTAACTCGATTTGGTGAACCCCAAGCAAGGAACTCTTCGTTTTGCCATCGTCCAACAGGTCTCTTTATGGTGATTGAGTTGAAGCAGGAGTTGTTGATTTCTTCTGACAAGACCATCGACGGCCGAGGAGCCAATGTGCAGAGAACGGTGCTGGCATCACCATGCAAACATCGTGGCCAAGGAAGGCAGCACGATAAGGGATTCCTTCAACCATACCGGATTCAACAAGGAGTGATGGTGATGTCATCCCTATTTTTGGAGTCTCCAACATTTGGATTCATCATGCTCCACCGCCTCACCATTTCAAATGGTGACCTGACTAAATATATCGATGTGATGTTTTTTGGAGCCAGCGACTCGTACGACGACGGAGACAAGATTATGCAGATCACAGTGGTCTTCAACCATTTCGGACAAGGATTGATTCAGAGGATGCCTAGGTGCAGATTTGGATTCGTGCACGTCCTCAACAACTACTATACTCGTACC 897 0.4615 MTTKVTMILLFTFTAMFTFTAMFHVLLALLNKPTIALIAYVSSPKEVTEDLNLALICTCLFSCTLLTLFVAWENSTAMRRELKEKKMNGRDGCEASNPIDTCWRLDQRPLQVGQVQSKGFGRRPPAGSVDPSMLSLVTRFGEPQARNSSFCHRPTGLFMVIELKQELLISSDKTIDGRGANVQRTVLASPCKHRGQGRQHDKGFLQPYRIQQGVMVMSSLFLESPTFGFIMLHRLTISNGDLTKYIDVMFFGASDSYDDGDKIMQITVVFNHFGQGLIQRMPRCRFGFVHVLNNYYTRT 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10553g00001 299 SMART amb_all 158 298 IPR002022 -
Mupr10553g00001 299 PANTHER PECTATE LYASE 18-RELATED 234 298 IPR045032 GO:0030570
Mupr10553g00001 299 SUPERFAMILY Pectin lyase-like 157 297 IPR011050 -
Mupr10553g00001 299 Pfam Pectate lyase 235 297 IPR002022 -
Mupr10553g00001 299 Gene3D - 233 299 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10553g00001 Mupr-Chr10553 3838 5044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10553g00001 74 297 Polysaccharide Lyase AT3G07010 32.234 1.72e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10553g00001 K01728 - gmx:100810615 162.54