Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10540g00003 ATGGCTTCTTCCGACAACTCCATCAAAATCCATGAGCAGTGCATCGTTGCTCCACCCTCGGCAACTGCAACCAGCTTCACTCTCCCTCTAACCTTCTTTGACATTATTTGGCTAAGGTTTCATCCAGTTGAGCGCATCTTCTTCTACTCCCTTCCCCTTCCTCACTCCCAACCTTGTTTTTTCTTTGACAATCTCAAAACCTCACTCTCTCGTACCCTCCAACACTTTCTCCCTTCAGCCGGCAACGTCGTTTGGCCTTCTGATTCACCCAAACCCTTCATCCAATTCAACCCCGGTGATGGGGTTTCCTTTGTCTTAGCACAGTGTGATGTCGATGCAGAATTCGATCACTTGTTGGACCATTCACCCCGTGAAGCCACACAATCTCGTACTTTGGTACCCCACTTGCACTCATCAGATTCTCTTGCCTCAGTTATCTCCTTTCAGATAACTCTGTTTCCAAACAAGGGCTTTACCATAGGCATCAGCTCTCACCATGCTCTTTTTGATGGAAAATCTTCATCCATGTTCATCAAGGCTTGGGCTTATGCATGTAAATCCAATGAAGAAAAGTTAGAGGCTTTGTTTGATAGGGAACTCATCAAAGATCCAACTGGTCTTGAAAGTGTGTTCATAAATAACTGGAGAAAAATGGATACCAGCAACTGTCGAAGCTTAAAGATTATGTCACAACCAATCAAGGAGCACGCAGTTCGAGCCACGTTCGAGCTCACACGTGAAGATTTGGACAAGATAAAGAAAATGGTGTTATCCAAGTGGGAGTTAGTGGAGGAGGAAGCAGAACCAAATTTCGCTTCTTCAAATTCAAAGCCAACTACTTTGTCTACCTTTGTGATTTCCTGTGCTTATGTGTCTGTCTGCATTGTTAAAGCATTTCACAAAGCCCAAATTATACAGAAATTCGCTCTCGGGTTCCCTTTTGATTGCAGGGCACGGTTAGAGCCTCCAATCCCTGAGAACTATTTTGGCAATTGTGTAGCTTCTCATATAGTGGATGCAGAGCTAGATGATTTTATAAAAGAGGATGGGGTGGTCATTGTTGCTAAGAGGATTTGGAGTAAAGTAAAAATGTTGGATAAGGGAGCTCTTGATGGAGTAGAGACAATGTCGTCTAACCATATGGCTAAGTCAAGCGAGGGAGTTGAGGTAATAGGAGTTGCGGGCTCCAACCGACATGGTATTTATGGAATTGATTTTGGTTGGGGAAGGCCTGCGAAGGTGGAGATAACATCCATAGATAAAGGTGTAAGCATTGGGTTAACAGAGAGCAAGGATGGGAGAGGTGGTGTTCAACTGGGGCTAGTTCTCAATAAACATGTCATGGATCACTTTCATGCTCTTTTTCATGCACGTTTATCCTTTGACTAA 1389 0.4392 MASSDNSIKIHEQCIVAPPSATATSFTLPLTFFDIIWLRFHPVERIFFYSLPLPHSQPCFFFDNLKTSLSRTLQHFLPSAGNVVWPSDSPKPFIQFNPGDGVSFVLAQCDVDAEFDHLLDHSPREATQSRTLVPHLHSSDSLASVISFQITLFPNKGFTIGISSHHALFDGKSSSMFIKAWAYACKSNEEKLEALFDRELIKDPTGLESVFINNWRKMDTSNCRSLKIMSQPIKEHAVRATFELTREDLDKIKKMVLSKWELVEEEAEPNFASSNSKPTTLSTFVISCAYVSVCIVKAFHKAQIIQKFALGFPFDCRARLEPPIPENYFGNCVASHIVDAELDDFIKEDGVVIVAKRIWSKVKMLDKGALDGVETMSSNHMAKSSEGVEVIGVAGSNRHGIYGIDFGWGRPAKVEITSIDKGVSIGLTESKDGRGGVQLGLVLNKHVMDHFHALFHARLSFD 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10540g00003 462 Gene3D - 234 462 IPR023213 -
Mupr10540g00003 462 Pfam Transferase family 8 453 - -
Mupr10540g00003 462 Gene3D - 7 227 IPR023213 -
Mupr10540g00003 462 PANTHER - 8 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10540g00003 Mupr-Chr10540 2915 4315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10540g00003 8 441 Monolignol Biosynthesis Gene Families AT5G48930 26.444 1.26e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10540g00003 - - gmx:100813762 689.493