Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1051g00005 ATGGCTTTTTCCATTGCTTTCAAAAACCTTAATTCTAAGCGCCTCCTTTTCTCTTTGCATTTCACGAATGTTTACCATTCAGTCTCTCGTGGAACTTGCACCATATTCCAAAACTGCAATGCATCTTCTTTGGATCTCTTTTCTCTTCGGAGATCCATGGCCACTTTCACTCGAACAAAGCCACATCTCAATGTGGGCACAATTGGGCATGTTGATCATGGGAAAACCACACTAACTGCTGCAATTACCAAGGTGCTAGCGGAAGAAGGTAAAGCCAAGGCCATTGCCTTTGAGGAAATAGACAAGGCTCCTGAGGAGAAGAAGAGAGGAATTACTATTGCTACTGCTCATGTAGAGTATGAGACAGAAAAGAGGCACTATGCCCATGTTGATTGCCCAGGACATGCAGACTATGTTAAGAACATGATAACTGGAGCTGCACAAATGGATGGTGGAATTCTTGTGGTTTCTGCTCCAGATGGGCCAATGCCTCAAACAAAGGAACATATACTGCTTGCTCGTCAGGTTGGTGTGCCATCATTGGTCTGTTTTCTGAATAAGGTTGATGCTGTTGACGATCCAGAGTTGCTTGAACTTGTGGAAATGGAGCTTCGTGAACTGCTTAGTTTCTACAAATTTCCTGGGGATGAGATCCCAATTGTACGAGGTTCAGCCCTGTCTGCTTTGCAAGGAACTAATGAAGAACTTGGGAAGAAGGCTATATTGAAACTAATGGATGCTGTGGATAAATACATTTCTGATCCTGTGCGGAAACTTGACAAGCCTTTCTTAATGCCAATAGAAGATGTTTTCTCAATTCAAGGGCGTGGAACTGTTGTGACCGGTCGTGTTGAACAAGGCACCATCAAAGTAGGTGAGGAGGTTGAAGTATTGGGACTAACACAGGGTGGACCTTTGAAGACTACTGTAACTGGTGTGGAAATGTTCAAGAAAATTTTGGATAGAGGGGAAGCTGGTGATAATGTGGGACTTCTTCTACGTGGTCTAAAGCGTGATGATGTACAACGTGGAATGGTCGTGACCAAGCCTGGTGCATTGAAAACATATAAGAAGTTTGAAGCAGAGATTTATGTCCTCTCAAAGGACGAAGGTGGCCGTCATACTGCTTTTTTCTCTAACTATAAGCCTCAGTTTTATTTGAGGACTGCAGATGTTACTGGAAAGGTGGAATTACCCGAAAGTATTAAGATGGTTATGCCTGGTGATAATGTGGCTGCAACTTTTGAGCTGATATCACCTGTTCCTCTAGAAATA 1275 0.4314 MAFSIAFKNLNSKRLLFSLHFTNVYHSVSRGTCTIFQNCNASSLDLFSLRRSMATFTRTKPHLNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFEEIDKAPEEKKRGITIATAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPGDEIPIVRGSALSALQGTNEELGKKAILKLMDAVDKYISDPVRKLDKPFLMPIEDVFSIQGRGTVVTGRVEQGTIKVGEEVEVLGLTQGGPLKTTVTGVEMFKKILDRGEAGDNVGLLLRGLKRDDVQRGMVVTKPGALKTYKKFEAEIYVLSKDEGGRHTAFFSNYKPQFYLRTADVTGKVELPESIKMVMPGDNVAATFELISPVPLEI 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1051g00005 425 FunFam Elongation factor Tu 51 255 - -
Mupr1051g00005 425 CDD EFTU_II 263 351 IPR033720 -
Mupr1051g00005 425 Gene3D Translation factors 392 425 - -
Mupr1051g00005 425 FunFam Elongation factor Tu 258 388 - -
Mupr1051g00005 425 CDD EFTU_III 354 424 - -
Mupr1051g00005 425 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 101 116 IPR031157 -
Mupr1051g00005 425 Pfam Elongation factor Tu GTP binding domain 60 252 IPR000795 GO:0003924|GO:0005525
Mupr1051g00005 425 NCBIfam small GTP-binding protein domain 64 199 IPR005225 GO:0005525
Mupr1051g00005 425 NCBIfam elongation factor Tu 52 424 IPR004541 GO:0003746|GO:0005525|GO:0006414
Mupr1051g00005 425 Hamap Elongation factor Tu [tuf]. 51 424 IPR004541 GO:0003746|GO:0005525|GO:0006414
Mupr1051g00005 425 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 357 424 IPR009001 -
Mupr1051g00005 425 Gene3D Translation factors 258 388 - -
Mupr1051g00005 425 Gene3D - 52 255 IPR027417 -
Mupr1051g00005 425 PANTHER ELONGATION FACTOR TU-RELATED 54 424 - -
Mupr1051g00005 425 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 60 256 IPR000795 GO:0003924|GO:0005525
Mupr1051g00005 425 SUPERFAMILY Translation proteins 257 353 IPR009000 -
Mupr1051g00005 425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 278 IPR027417 -
Mupr1051g00005 425 CDD EF_Tu 61 255 IPR041709 -
Mupr1051g00005 425 PRINTS GTP-binding elongation factor signature 64 77 IPR000795 GO:0003924|GO:0005525
Mupr1051g00005 425 PRINTS GTP-binding elongation factor signature 108 116 IPR000795 GO:0003924|GO:0005525
Mupr1051g00005 425 PRINTS GTP-binding elongation factor signature 144 155 IPR000795 GO:0003924|GO:0005525
Mupr1051g00005 425 PRINTS GTP-binding elongation factor signature 128 138 IPR000795 GO:0003924|GO:0005525
Mupr1051g00005 425 PRINTS GTP-binding elongation factor signature 181 190 IPR000795 GO:0003924|GO:0005525
Mupr1051g00005 425 Pfam Elongation factor Tu C-terminal domain 353 424 IPR004160 -
Mupr1051g00005 425 Pfam Elongation factor Tu domain 2 277 348 IPR004161 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1051g00005 Mupr-Chr1051 33512 37124 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1051g00005 58 367 Eukaryotic Initiation Factors Gene Family AT5G60390 33.626 9.30e-43 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1051g00005 K02358 - gmx:102667962 762.681