LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr1051g00002	ATGCTTCCTGATCAGAGAAAAAAGTCATCTGTGGATGTGGACTTCTTTACTGAATATGGTGAAGGGAGTAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTCTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATCAATGACATATTTGAACATGTTTCTGATGCCACTCGCATTCTTCGTGAGATTAAGCTTCTTAGACTTTTACGCCATCCAGATATTGTGGAAATCAAACATATTCTGTTACCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTCTTTGAACTCATGGAATCTGATTTACATCAGGTCATCAAAGCTAATGATGATCTGACACCAGAGCATTACCAGTTTTTCCTCTATCAGCTTCTTCGAGGCATGAAGTATATACACACAGCTAATGTTTTTCACCGTGATCTAAAGCCAAAAAACATTTTAGCAAATGCTGACTGCAAACTGAAGATTTGTGACTTTGGTCTTGCCAGAGTGGCTTTCAATGATACTCCCACTGCTATTTTCTGGACAGATTATGTTGCAACGAGGTGGTACAGGGCTCCTGAGTTGTGTGGATCCTTTTTTTCCAAGTATACACCAGCTATAGACATATGGAGCATTGGCTGCATTTTTGCAGAACTTTTAACTGGAAAACCTCTTTTTCCTGGGAAGAATGTTGTCCATCAGCTAGACCTTATGACTGATCTTCTTGGAACTCCATCTCCTGAAGCCATTGCTAGGGTAAGGAATGAGAAAGCTCGGAGATACTTGAGCAGCATGCGTAAGAAGAAACCAGTTCCTCTCACACAGAAGTTTCCTAATGCAGACCCCCTTGCTCTTCGTTTGTTAGAAAGAATGTTGGCATTTGAGCCTAAGGACCGACCTACTGCTGAAGAGGCTCTAGCGGATCCATATTTTAAGGGCTTGGCCAAGGTTGAGAGAGAACCATCTGCTCAGCCAGTTACCAAGATGGAATTTGAATTTGAGAGACGCCGGATAACAAAGGAAGATGTACGAGAACTTATATACCGAGAGATTCTGGAGTACCATCCAAAGATGTTGAAGGAATTTCTAGAGGGAGCAGAGCCAACAGGTTTCATGTATCCAAGTGCTGTGGACCACTTCAAGAAGCAATTTGCATATCTTGAGGAGCATTATGGCAAAGGGGGAACTGTTGCTCCACCCGAGAGGCAGCATGCATCATTACCCAGACCTTGTGTGCTGTATTCAGACAACTCAATACAGAATACGTCTGAGGTTGCAGATGGTCTATCCAAATGTTGCATCAAAGAAGTTGAGAAACAACCTGTAGATAGGAGTAGTGCTATCCCTATGTCTCGGCTTCCGTTACAAGCACCTCAAAATATTCAAGGTGTTGCTGCAAGGCCTGGAAAGGTTGTTGGTTCAGTAATGCGTTACAACAACTGTGGAGTAGCAGTGACGGCCGAGGCTGAACAGCGTAGGGTGGTCAGGAATCCATCTGTTTCAGCTCAGTTTGCCGCGTCGAGCTGTTCATATCCTAGGAGAAACCCAAACTATAAAAATGAGAGGGGGGCAGAGGATGATGGAATTGAAGGTTCAAATGGGCTGCAGCCAAAGCCTCAATACATGGCAAGAAAAGTGGCTGCTGCTCAAGGTGGAGCTGGTGGTCAGTGGAGGGCAAATGTGAATTCC	1704	0.4349	MLPDQRKKSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGMKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPVPLTQKFPNADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVAPPERQHASLPRPCVLYSDNSIQNTSEVADGLSKCCIKEVEKQPVDRSSAIPMSRLPLQAPQNIQGVAARPGKVVGSVMRYNNCGVAVTAEAEQRRVVRNPSVSAQFAASSCSYPRRNPNYKNERGAEDDGIEGSNGLQPKPQYMARKVAAAQGGAGGQWRANVNS	568

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mupr1051g00002	568	ProSitePatterns	MAP kinase signature.	60	163	IPR003527	GO:0004707\|GO:0005524\|GO:0006468
Mupr1051g00002	568	SUPERFAMILY	Protein kinase-like (PK-like)	22	320	IPR011009	-
Mupr1051g00002	568	Gene3D	Transferase(Phosphotransferase) domain 1	111	339	-	-
Mupr1051g00002	568	ProSiteProfiles	Protein kinase domain profile.	25	316	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mupr1051g00002	568	Pfam	Protein kinase domain	25	316	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mupr1051g00002	568	MobiDBLite	consensus disorder prediction	516	542	-	-
Mupr1051g00002	568	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	24	340	-	-
Mupr1051g00002	568	CDD	STKc_TDY_MAPK	24	361	-	-
Mupr1051g00002	568	Gene3D	Phosphorylase Kinase; domain 1	40	361	-	-
Mupr1051g00002	568	FunFam	Mitogen-activated protein kinase	15	119	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr1051g00002	Mupr-Chr1051	14391	20972	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr1051g00002	1	562	MAP Kinase Gene Family	AT5G19010	80.628	0.0	947

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_MAPK	Mupr1051g00002		Pkinase	6.3e-68	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr1051g00002	-		-	gmx:100814013	1088.56

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