Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1051g00001 ATGAAAGGAGTGACAATGGTGAGGGTTAGTGTCTTGAATGATGCTCTCAAGAGCATGTATAATGCTGAGAAGCGGGGGAAGCGCCAAGTCATGATTAGGCCATCCTCGAAAGTGATTATAAAATTCCTGTTGGTGATGCAGAAGCATGGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAGATTGTTGTTGAATTGAATGGTAGACTGAATAAATGTGGGGTTATTAGTCCCCGTTTTGATGTGGGTGTCAAAGAGATTGAAGGTTGGACTGCTAGGCTGCTCCCTTCAAGACAGTTTGGATATATTGTGTTGACTACCTCTGCTGGCATCATGGATCACGAAGAAGCTAGGAGGAAGAATGTTGGTGGGAAAGTGCTGGCCATGGAGGGTGCTTCTGATCCATTGTTTCTTTGTGATTTTGATGGACCCGGGATCTTGAGTGTTTGCCCCAAAAAGGACTTGGGAGCACGTGAGAGTTATCATCAATAG 504 0.4484 MKGVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLAMEGASDPLFLCDFDGPGILSVCPKKDLGARESYHQ 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1051g00001 167 ProSitePatterns Ribosomal protein S8 signature. 105 122 IPR000630 GO:0003735|GO:0005840|GO:0006412
Mupr1051g00001 167 PANTHER 40S RIBOSOMAL PROTEIN S15A 6 133 IPR000630 GO:0003735|GO:0005840|GO:0006412
Mupr1051g00001 167 SUPERFAMILY Ribosomal protein S8 9 132 IPR035987 GO:0003735|GO:0005840|GO:0006412
Mupr1051g00001 167 FunFam 40S ribosomal protein S15a 75 134 - -
Mupr1051g00001 167 Gene3D - 75 133 - -
Mupr1051g00001 167 Pfam Ribosomal protein S8 12 132 IPR000630 GO:0003735|GO:0005840|GO:0006412
Mupr1051g00001 167 Gene3D - 6 74 - -
Mupr1051g00001 167 FunFam 40S ribosomal protein S15a 6 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1051g00001 Mupr-Chr1051 3306 8837 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1051g00001 6 133 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.094 3.33e-89 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1051g00001 K02957 - gmx:100798674 251.906