Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10485g00002 ATGGCTTCTTGTTCCCGTCTGTCTGTTACCAAAAGATATGATGTTTTCATAAGCTTTAGAGGAGAGGATACTCGCCGTGAGTTCACAAGCCATCTTCATGCTGCTCTCTGCAGAAACAGCGTCGACACTTACATAGATTACAGGATCCAGAAAGGAGAGGAGGTTTGGGTAGAACTAAAGAAAGCCATCAAAGAGTCCACTCTCTTCTTGGTTATCTTCTCAGAGAACTATGCGTCTTCTACTTGGTGTTTGAACGAACTGGTAGAACTAATGGAATGCAAGAAAGGAGGAGAGGACGTTGAAGTAATTCCTGTGTTCTACAAAATAGAGCCATCTCAGGTGCGCAAACAAAGTGGGAGTTATCACAAGGCATTGGCAAAACACAAGAAGGAGGGTAAGGAGAAGATGCAAAAGTGGAAGGACGCTCTCTACGAAGCAGCCAATTTATCTGGTTTCCATTCTGACGTATACAGGACTGAATCTGACTTGATTGAAGACATTATCAAAGTTGTTTTGCAAAAACTAAATCACAAGTACCCAAATGACTATAGAGGCCTTTTCATATCTGATGAAAACTATACAAACATTGAATCTTTACTGAAAATTGAGTCAGATGAAGTTCGAGTGATTGGAATTTGGGGCATGGGAGGTATTGGTAAAACAACTCTTGCTTCTGCTATTTTTCATAAGGTTTCTTGTCAGTATAAAGGCACTTGCTTCTTAGAAAATGTGGAAGAGGAATCAAAAAGGCATGGACTAAATTACGTATGCAACAAACTTCTTTCTAAGTTACTAAGGGAAAATCTTGATATTGACACTGCTAAAGTAATTCCTTCTATTGTTACAAGAAGACTCAAGCATAAGAAAGTTTTCATTGTACTAGATGATGTGAATACTTCACAACTTCTTGAAAATTTGGTCGGAGTGAGTCGTGACTGGCTAGGAGTTGGAAGCATAGTCATTGTGACAACCAGAGATAAGCATGTACTTATACCTAAAGTTGTTGACAAAATTCATGAAGTCAAGAAAATGAACTTTGAAAACTCCCTAAAACTTTTCAGCTTAAATGCTTTTGGCAAAACCTATCCTATAAAGGAATATGAGGAGTTATCAGAAAGAGCAATGGTTTATGCCAAAGGAATCCCTTTAGCTCTGAAAGTTTTGGGATCATTTCTTCGTTCCAGAAGTAAAACTGAATGGGATAGTGCACTACGTAAATTGAAGAAAAATCCCAATGCAGAAATTCAGGCAGTGTTGAGATTGAGTTATGAAGGATTAGATGATGAAGAGAAAAACATTTTTCTAGACATAGCTTGTTTTTTTAAAGGACAAAGAGAAGACCGTGTAACAAAAGTATTAAATGACTGCGATTTTTCTGCAGATATAGGGATAAGTAGACTTTTAGACAAAGCTCTTATCACTATTACTTCATATAATGATTGCATAGATATGCACAATCTGATACAAGAAATGGGTAGAGAAATTGTTCGTGAAGAATCTATTAAAAATCCCGGGCAACGCAGTAGATTGTGGGATCCTGAGGAAGTCTATGATGTATTGACAAATAATAGAGGAACTGATGCAGTTGAAGGAATATGGTTAGATAGGACTCAAATTACATACATAAATATAAGCTCCGAAGCATTCAGAAAGATGTCAAACCTGAGATTACTTGCTTTGCAATCCCTCAACGAAGACTCTGAGATAATTAATTCAGTGTATCTTCCAAAGGGTCTTGATTTCTTACCTAAAAACTTAAGACATTTTGCGTGGAATGGATATCCTTTAGAATCTCTACCCTCAACTTTTTGCCCTGAGAAGCTTGTCCAGCTTTCCTTGCGATACAGCAACGTGGAAAAACTTTGGGATGGAGTACAGAATTTGCCAAATTTGGAGAAAATTGACCTTTTCGGGTCCAAACACCTTATGGAGTGTCCAAATTTGTCTCATGCCCCAAATCTTAAAGCTTTAAATATAAGCGACTGTGAAAGCTTGCCTTTTGTTGATCCATCAATTTTCTCCCTCCCGAAGCTTGAATCTTTAGATGTGAGTGGATGCATGTCGCTTGAGAGCCTTAGCAGCAACACTTGGTCACAATCTCTCCGAGGTTTGTATTTAGATGATTCAGGTTTGAATGAAGTCCCCCCATCAATTTTGCTTCTCAGGAATCTGAGAACCTTTTCTTTTTCAATTAATTATAGTCTTGTGAATCTTCCTGAAAACTTTGCCAAACAAATTGTACTTTCTGAGTCAAAGAAACATGAATGCGACATTTTGCTCTCATTAGATAAGGTACTGCCTAGCTCTGGCTTCCGGTCAGTAACAAGTCTAATCTTTTACAATTGCGAAAGCTTGTGTGAAATCCCAGACAACATCTCCTTGTTATCATCATTGCAATCCTTATGCTTATATTTTACTGGCATCATAAGCTTACCTGAAAGCGTCAAGTGTTTGCCAAGACTCAAACTTGTTGAAGTTGGTGAATGCAAAAAGCTTCAACGTATACCTGCACTTCCACAATCCACTCACCGCTTCTATGTCTGGAACTGCCATTCTCTTCAGACAGTGTTAAGTTCCACGGTTGAACCATCCAAAACACCCGGTTGTATTTTTCTGCTTCCTAACTGCATAAGCTTGGATGAATCTTCGTATGATGCAATTTTGAAAGATGCCATTGCTAGGATTGAATTTGGAGCAAAACCACGGTTACAAGTAGTATTTGAAAATGAAGAAGATGCATCCACTGATATTGATTACGATAATGATAATTATCATTATTATTATTATTTTGGAGCAGTAAGAAATGCTAAAATTTGCTACTATTTACCAGCTAGAAGTGGCAAAGTTCGAGAGTGGTTTCATTGCCACTTTACACAAGCTTTGGTCACTATTGAACCTCCCCCTAATTTGTTGGGATTCATTTTCTACTTGGTTGTTTCTCAATTCGAATTAGAATACATTGGATGCTGTGGAAGTATTGGATGTGAATGCTACTTGGAAATTAGCCCAGATGAAAGGATCAATATAACAAGTTTCTTTATAGATGAATACGTCTTGCTTAATGCTGAAATTCCATTTGAACTTATGGAAGATCATGTATTTTTATGGTACGATCCACAATTTTGCAAACAGGTAATGGAAGCAATTGAAGAGAGGAAAAATGACAATAGCAGCACTCATGATCCAAAGCTCATATTTAAATTCTTCGCTCAAACCGAAGATAAGGATCAGGAAGTAATGATAGAAGAGTGTGGATTTCGGTGGATGTATTCCTTAGAAGAAGGAGGACGTAAATCCAATAGAAGCAGTGACATTCATGAAGTAGAAGCCAATGTTGTCCCAGATAAAGTGGAGGACTCTGAGTCTAATGAGCAAGAAGAAACACTTGATCCAACAAAAAAATTAACTTCAAACTTGGAAGCAGAAGAAACAGAAGAATTGAGCACCCACAGCAATAGCATATCCATGGCTTCTTCTTCCAGTCTGTCTGTTACCAAAAAATGTGATGTTTTCATTAGCTTTAGAGGAGAGGACACTCGCGGTGAGTTCACAAGCCATCTTCATGCTGCTCTCTGCAGAAACAGCATCGACACTTACATAGACTACAGGATCCAGAAAGGAGAGGAGGTTTGGGTAGAACTCGTGAAAGCCATCAAAGAGTCCAATCTCTTTTTGGTTATCTTCTCAGAGAACTATGCGTCTTCTACTTGGTGCTTGAATGAACTGGTAGAACTAATGGAATGCAGGAAAGAAGGAGAAGATGTAGATGTAATTCCAGTATTCTACAAAATAGAGCCATCTCATGTACGCAAACAAACTGGGAGTTGTCGCACGGCATTGGCAAAACACAAGAAGGAGAGTAAGGAGAAGATGCAAAAAACCGAATCTGACTTGGTTGACGACATTATCAAAACTGTTTTGAAAAAACTAAACCACAACTCCACAAATGACTTTAGAGGCCTTTTCATATCTGATGAGAACTATACAAATATTGAATCTTTACTGAAAATTGATTCAAAGGAAGTTCGCGTCATTGGAATTTGGGGCATGGGAGGAATTGGTAAAACAACTCTTGCTGCTGCTATTTTTCAAAGGGTTTCTTCTCAGTATGAAGGCACTTGCTTCTTAGAAAATGTGGCAGATGAATCAAAAAGGCATGGACTAAATTACATATGCAACAAACTTCTTTCTAAGTTACTAAGGGAAGATCTTCATATTGACACTGCTAAAGTCATACCCTCTATTGTTACAAGAAGACTCAGGCATAAGAAAGTTTTCATCGTACTAGATGATGTGAATAGTCCACAACTTTTAGAAAATTTGGTCGGAGTGGGTCGTGACTGGCTAGGAGCTGGTAGCAGAGTCATTGTGACTACCAGAGATAAGCATGTACTTATAAGCAGTGATGTTAACAAAATTCATGAAGTCAAGGAAATGAACTTTGAAAACTCCCTTAAACTTTTCAGCTTAAATGCCTTTGGCAAAAAATATCCTGAAGAGGAATATGAGGAATTATCAAAAAGAGCAATAGGTTATGCCAAAGGAATCACTTTAGCTTTGAATGTTTTGGGATCATTTCTTTGTTCCAAGAGTGAAAATGAATGGGATAGTGCACTACGTAAGTTGAAGAAAATTCCCAATGCGGAAATTCAGGCAGTATTGAGATTGAGTTATGATGGATTAGATGATAAGGAGAAAAACATTTTCCTAGACATAGCTTGTTTTCTTGAAGGACAAGAAAGAGACCATGTAACAAAAATATTAAATGCCTGCGATTTTTCTGCAGATATAGGGATAAGATATGCACGATCAATACAAGAAATGGGTAGAAAAGTTGTTCGTGATGATATTAAAAATCCTGGGCAACGCAGTAGATTGTGGGATCCTGAGGAAGTCTATGACGTATTGGCAAATAATAGAGGAACTAGTGCAGTTGAAGGAATATGGTTAGATATTAGTCAAATTACATATATAAATTTAAGCTCCAAAGCATTCAGAAAGATGCCGAACCTGAGATTACTTGCTTTCCAATCCCTCAATGGAGACTTT 5049 0.3773 MASCSRLSVTKRYDVFISFRGEDTRREFTSHLHAALCRNSVDTYIDYRIQKGEEVWVELKKAIKESTLFLVIFSENYASSTWCLNELVELMECKKGGEDVEVIPVFYKIEPSQVRKQSGSYHKALAKHKKEGKEKMQKWKDALYEAANLSGFHSDVYRTESDLIEDIIKVVLQKLNHKYPNDYRGLFISDENYTNIESLLKIESDEVRVIGIWGMGGIGKTTLASAIFHKVSCQYKGTCFLENVEEESKRHGLNYVCNKLLSKLLRENLDIDTAKVIPSIVTRRLKHKKVFIVLDDVNTSQLLENLVGVSRDWLGVGSIVIVTTRDKHVLIPKVVDKIHEVKKMNFENSLKLFSLNAFGKTYPIKEYEELSERAMVYAKGIPLALKVLGSFLRSRSKTEWDSALRKLKKNPNAEIQAVLRLSYEGLDDEEKNIFLDIACFFKGQREDRVTKVLNDCDFSADIGISRLLDKALITITSYNDCIDMHNLIQEMGREIVREESIKNPGQRSRLWDPEEVYDVLTNNRGTDAVEGIWLDRTQITYINISSEAFRKMSNLRLLALQSLNEDSEIINSVYLPKGLDFLPKNLRHFAWNGYPLESLPSTFCPEKLVQLSLRYSNVEKLWDGVQNLPNLEKIDLFGSKHLMECPNLSHAPNLKALNISDCESLPFVDPSIFSLPKLESLDVSGCMSLESLSSNTWSQSLRGLYLDDSGLNEVPPSILLLRNLRTFSFSINYSLVNLPENFAKQIVLSESKKHECDILLSLDKVLPSSGFRSVTSLIFYNCESLCEIPDNISLLSSLQSLCLYFTGIISLPESVKCLPRLKLVEVGECKKLQRIPALPQSTHRFYVWNCHSLQTVLSSTVEPSKTPGCIFLLPNCISLDESSYDAILKDAIARIEFGAKPRLQVVFENEEDASTDIDYDNDNYHYYYYFGAVRNAKICYYLPARSGKVREWFHCHFTQALVTIEPPPNLLGFIFYLVVSQFELEYIGCCGSIGCECYLEISPDERINITSFFIDEYVLLNAEIPFELMEDHVFLWYDPQFCKQVMEAIEERKNDNSSTHDPKLIFKFFAQTEDKDQEVMIEECGFRWMYSLEEGGRKSNRSSDIHEVEANVVPDKVEDSESNEQEETLDPTKKLTSNLEAEETEELSTHSNSISMASSSSLSVTKKCDVFISFRGEDTRGEFTSHLHAALCRNSIDTYIDYRIQKGEEVWVELVKAIKESNLFLVIFSENYASSTWCLNELVELMECRKEGEDVDVIPVFYKIEPSHVRKQTGSCRTALAKHKKESKEKMQKTESDLVDDIIKTVLKKLNHNSTNDFRGLFISDENYTNIESLLKIDSKEVRVIGIWGMGGIGKTTLAAAIFQRVSSQYEGTCFLENVADESKRHGLNYICNKLLSKLLREDLHIDTAKVIPSIVTRRLRHKKVFIVLDDVNSPQLLENLVGVGRDWLGAGSRVIVTTRDKHVLISSDVNKIHEVKEMNFENSLKLFSLNAFGKKYPEEEYEELSKRAIGYAKGITLALNVLGSFLCSKSENEWDSALRKLKKIPNAEIQAVLRLSYDGLDDKEKNIFLDIACFLEGQERDHVTKILNACDFSADIGIRYARSIQEMGRKVVRDDIKNPGQRSRLWDPEEVYDVLANNRGTSAVEGIWLDISQITYINLSSKAFRKMPNLRLLAFQSLNGDF 1683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10485g00002 1683 SUPERFAMILY L domain-like 484 884 - -
Mupr10485g00002 1683 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 177 - -
Mupr10485g00002 1683 Pfam NB-ARC domain 1332 1547 IPR002182 GO:0043531
Mupr10485g00002 1683 Pfam NB-ARC domain 198 417 IPR002182 GO:0043531
Mupr10485g00002 1683 Gene3D - 1479 1562 IPR042197 -
Mupr10485g00002 1683 Gene3D - 344 427 IPR042197 -
Mupr10485g00002 1683 SUPERFAMILY Toll/Interleukin receptor TIR domain 1157 1284 IPR035897 -
Mupr10485g00002 1683 Pfam TIR domain 1169 1314 IPR000157 GO:0007165
Mupr10485g00002 1683 Pfam TIR domain 13 181 IPR000157 GO:0007165
Mupr10485g00002 1683 MobiDBLite consensus disorder prediction 1126 1147 - -
Mupr10485g00002 1683 ProSiteProfiles TIR domain profile. 11 175 IPR000157 GO:0007165
Mupr10485g00002 1683 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 152 IPR035897 -
Mupr10485g00002 1683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1311 1572 IPR027417 -
Mupr10485g00002 1683 Gene3D - 1310 1474 IPR027417 -
Mupr10485g00002 1683 SUPERFAMILY "Winged helix" DNA-binding domain 1549 1636 IPR036390 -
Mupr10485g00002 1683 ProSiteProfiles TIR domain profile. 1166 1310 IPR000157 GO:0007165
Mupr10485g00002 1683 MobiDBLite consensus disorder prediction 1097 1119 - -
Mupr10485g00002 1683 Gene3D Ribonuclease Inhibitor 527 698 IPR032675 -
Mupr10485g00002 1683 Gene3D Ribonuclease Inhibitor 699 885 IPR032675 -
Mupr10485g00002 1683 SMART till_3 12 149 IPR000157 GO:0007165
Mupr10485g00002 1683 SMART till_3 1167 1313 IPR000157 GO:0007165
Mupr10485g00002 1683 Pfam Leucine Rich Repeat 607 626 IPR011713 -
Mupr10485g00002 1683 Gene3D - 1162 1309 IPR035897 -
Mupr10485g00002 1683 MobiDBLite consensus disorder prediction 1096 1154 - -
Mupr10485g00002 1683 Gene3D - 173 336 IPR027417 -
Mupr10485g00002 1683 Gene3D - 9 172 IPR035897 -
Mupr10485g00002 1683 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 846 IPR044974 GO:0006952
Mupr10485g00002 1683 SMART AAA_5 1341 1480 IPR003593 GO:0016887
Mupr10485g00002 1683 SMART AAA_5 206 345 IPR003593 GO:0016887
Mupr10485g00002 1683 FunFam Disease resistance protein (TIR-NBS-LRR class) 1164 1318 - -
Mupr10485g00002 1683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 437 IPR027417 -
Mupr10485g00002 1683 PRINTS Disease resistance protein signature 284 298 - -
Mupr10485g00002 1683 PRINTS Disease resistance protein signature 673 689 - -
Mupr10485g00002 1683 PRINTS Disease resistance protein signature 209 224 - -
Mupr10485g00002 1683 PRINTS Disease resistance protein signature 378 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10485g00002 Mupr-Chr10485 5159 15136 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10485g00002 6 821 WRKY Transcription Factor Family AT4G12020 32.155 3.45e-105 371