Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10483g00007 ATGAATTTCGAAAAAGGGAAAATGGAGTGCCAGCCACTAGAAAAAGCAAAACCAAAATACAGAAAGGGGTTATGGTCACCTGAAGAAGATAACAAGCTCAGAAACTATGTGCTTAAGCATGGTTATGGATGCTGGAGCTCTGTCCCCATCAAGGCAGGCTTGCAAAGAAATGGGAAGAGCTGCAGACTAAGGTGGATTAACTACCTGAGGCCAGGACTGAAAAGAGGGGTGTTCAGCAAACATGAGGAAGATACAATCATGGCCATTCACCACATGTTAGGCAACAAGTGGGCTCAGATAGCACAGCATTTGCCAGGAAGGACCGACAATGAGATAAAAAATTATTGGCATTCATATTTGAAAAAGAAAGTGATCAAAGCTAAAGAAATAGAATCTGACAAACAAATTCAGTATGCTGCTAGCTCAAGTTCAGATACAATGGAACACTCACTCTCTCCCCATAAACTTGCAACACAAGATCCAAGTTATGGATTGTTAGAAAACATGGACAAATCAACAGCACACTCTGATTACTCTTTCCCAGAGAACTATAACTTTTCCAAGGAGACTTGTCAAAGCTCCTTGCCAAAACTGTTTTTTTCTGAGTGGCTTTCACATGATCATGTAAACAGTGGAAGCTCAGTGAATTCTGATGATTCTTTGGCCTTGGGGAATGAATTTGATCAAAATCCAACTTTACAAGAAGCTATAATGAATATGCTAGAAGAAAACTTTGGTGAAGAGTATCATAATAGTCTAATTCACAGTTCAACCTCTGAGGCGTACAATTCACAGATTATGTCATCAAATCAAGTGGATGGAAGTGATTTCATCCATTGTATTCCTGGGACCGACTTATGTAGCAATTTCAGCATAATCAATGATGCAATGTAA 894 0.3937 MNFEKGKMECQPLEKAKPKYRKGLWSPEEDNKLRNYVLKHGYGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGVFSKHEEDTIMAIHHMLGNKWAQIAQHLPGRTDNEIKNYWHSYLKKKVIKAKEIESDKQIQYAASSSSDTMEHSLSPHKLATQDPSYGLLENMDKSTAHSDYSFPENYNFSKETCQSSLPKLFFSEWLSHDHVNSGSSVNSDDSLALGNEFDQNPTLQEAIMNMLEENFGEEYHNSLIHSSTSEAYNSQIMSSNQVDGSDFIHCIPGTDLCSNFSIINDAM 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10483g00007 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Mupr10483g00007 297 SMART sant 74 122 IPR001005 -
Mupr10483g00007 297 SMART sant 21 71 IPR001005 -
Mupr10483g00007 297 SUPERFAMILY Homeodomain-like 20 116 IPR009057 -
Mupr10483g00007 297 Gene3D - 22 74 - -
Mupr10483g00007 297 PANTHER MYB DOMAIN PROTEIN 55 10 257 - -
Mupr10483g00007 297 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Mupr10483g00007 297 FunFam MYB transcription factor 19 75 - -
Mupr10483g00007 297 FunFam MYB transcription factor 77 149 - -
Mupr10483g00007 297 CDD SANT 78 120 IPR001005 -
Mupr10483g00007 297 CDD SANT 25 69 IPR001005 -
Mupr10483g00007 297 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Mupr10483g00007 297 Pfam Myb-like DNA-binding domain 75 120 IPR001005 -
Mupr10483g00007 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 69 IPR017930 -
Mupr10483g00007 297 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Mupr10483g00007 297 Gene3D - 77 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10483g00007 Mupr-Chr10483 29337 33148 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10483g00007 14 205 MYB Transcription Factor Family AT5G52260 52.764 7.05e-61 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr10483g00007 Myb_DNA-binding 5.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10483g00007 K09422 - gmx:100803537 504.982