Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1047g00011 ATGGAAGAGAGAAACGATGGTGAGAAACTAGATGAGGTTATGCTCCCCGGTTTCAGGTTTCATCCAACTGACGAAGAGCTTGTTGGATTTTACCTAAAGAGAAAGATTCAGCAGAGGCCTCTATCTATAGAGCTCATCAAGCAGCTTGATATCTACAAGTATGATCCTTGGGATCTTCCAAAGTTGGCCACCACTGCAGAGAAAGAGTGGTATTTCTACTGCCCCAGAGACAGAAAGTACAGGAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGGTTCTGGAAAGCTACTGGGACTGATCGCCCTATCTATTCCTCGGAGGGTTCTAAGTGTATTGGACTCAAGAAATCACTAGTGTTCTACAAAGGTAGAGCTGCCAAAGGAATCAAAACTGATTGGATGATGCATGAGTTTAGACTACCTTCTCTCACTCACTCATCCTCATCCCCCAAGAAGTACATGGACAAGACCATTCCTGCTAACGAATCCTGGGCAATCTGCAGGATCTTCAAGAAAACCAATGCTACAGCACAAAGAGCTCTGTCTCACTGTTGGGTCTCTCCCTTACCTGAAACCACAACTTCTGATCATATGCAAACCATTGATAGAGACAGCAACCAATTTTGTCCAGCAAACATGCCATTGGCAAAGAAAAGTAGCCCAACCAGCCAGTTTTGTACTTTTAATCACAATGACACACAACACTTAACCACCACTAGTAGCACTACTCCTTGTCCTTTAGATGCTGTTGCCTCTTATAACAAACCAATTATTAATCCATTGCTTTACAAACCCTTAGACCGGTTACCCATTTCAAATGGAGACCTTAGCACTGGCTTAATATTCTCATCCCCTCTTGAAACTTCAACCACCAGTGCTAAATCTTCAATGGATGTTTCTTCCTTGCTATTGAGTACCTCATCATCTTCTATGCTTGGAGATTTTAGTAAGACCTCGGAGGGAATAACCACAAATTTTGGTGCGTTACAAGAGCATAGTAATGGCTACCACATTCCATTACTACGTGAAATGCAAGGGACCATTGGCAACCACGATGACAATGTATTGGTAAAGATTCCTAATGTGAACGTGCCTCGTGCTGATGACCAACAATTGGAAACAGTAAGATCCGTTGGGTTTCCATTCACTATGCCGTTCAATATTGGCGATGCATGGAAGTCAAATTTGCTTTGGGATACTTCCTCTTTGTCCTTGTGA 1221 0.4308 MEERNDGEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLSIELIKQLDIYKYDPWDLPKLATTAEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRLPSLTHSSSSPKKYMDKTIPANESWAICRIFKKTNATAQRALSHCWVSPLPETTTSDHMQTIDRDSNQFCPANMPLAKKSSPTSQFCTFNHNDTQHLTTTSSTTPCPLDAVASYNKPIINPLLYKPLDRLPISNGDLSTGLIFSSPLETSTTSAKSSMDVSSLLLSTSSSSMLGDFSKTSEGITTNFGALQEHSNGYHIPLLREMQGTIGNHDDNVLVKIPNVNVPRADDQQLETVRSVGFPFTMPFNIGDAWKSNLLWDTSSLSL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1047g00011 406 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 237 - -
Mupr1047g00011 406 SUPERFAMILY NAC domain 13 173 IPR036093 GO:0003677|GO:0006355
Mupr1047g00011 406 Gene3D NAC domain 23 178 IPR036093 GO:0003677|GO:0006355
Mupr1047g00011 406 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Mupr1047g00011 406 FunFam NAC domain-containing protein 35 23 176 - -
Mupr1047g00011 406 ProSiteProfiles NAC domain profile. 14 173 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1047g00011 Mupr-Chr1047 27769 29709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1047g00011 2 317 NAC Transcription Factor Family AT1G26870 58.055 1.08e-115 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr1047g00011 NAM 2.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1047g00011 - - vra:106768003 690.649