Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10477g00001 ATGGGTCACCATTCTTGCTGCAACCAACAGAAGGTTAAGAGAGGGCTTTGGTCCCCCGAGGAAGATGAGAAACTCATCAGATACATTACCACTCACGGCTATGGTTGCTGGAGTGAAGTTCCAGAGAAAGCTGGACTTCAAAGGTGTGGTAAGAGTTGTCGCCTAAGATGGATTAATTATTTGAGGCCGGATATTAGAAGAGGCAGGTTTACACCTGAAGAGGAGAAGTTAATTATAAGCCTTCATGGGGTTGTTGGCAACAGATGGGCTCACATTGCAAGTCACTTACCAGGTAGAACTGACAACGAAATAAAGAACTATTGGAATTCTTGGATCAAAAAGAAAATCAGAAAGCCTTCGGTGACTTCATCAATCACCACTACACAAAGTGTTGATCAGACTCAGTATAATTATAATTCCAATCAACTAGATCACTTTGTGAACCAAGAAAATATAACAGCAAAGCCACCGGTACAAGAAACCTTATTTTCCTCCACGTGCCCCTTATTTATGTTTGACACTAGTTCATTAGATCAAGAGACAACAACAATAGACACGAATGTACGAGCAGAACTATTCCATGATTCATTGGGTTTGAGCACTGAAATGTGGAACTTGAGCCGCCACCAAGTCCATGCCTTTCCTCCTCAACCTGCAGTAACTTTTTCAGCAGTTATGGACACTACGAATTATCTGCCACCATTGATAGAGAACATGGTGCCAAATATTGAAGTGCAGTCTTGTAGTATAGACGAGGAAGGAGAAATGGCACTGGAGTGTTTGCGGAGACAAGAGTTGAATGAGTGGGTAGAGAATCAACAAGAATGTCCCAGCAGCTTTCTTTTCTGGGACAATGTTGAAGGACAACTTGGAGGGGAAGAATTAGCACCAAACACGTCAAATATGGGAACCAATACACTTTCACCTTTTCCTTCCTCTTTAGCTTCTTACGTAGCCGTCTGCACCGTAGCAACCATGATCATTCCCGAGAAGAACCGTAGAGAGATCTGCAAATACCTCTTCCAAGAGGGAGTTTGCTATGCAAAGAAGGACTTCAATCTTGCAAAGCACCCAGACATTGATGTGCCCAATCTGCAGGTGATAAAGCTGATGCAGAGCTTCAAGTCTAGGGAATACGTGCGTGAGACATTTGCGTGGATGCACTATTACTGGTTCCTAACCAACGATGGAATTGAGTTCCTCAGGACTTACCTCAACCTGCCCTCTGAAATCGTGCCGGCCACTCTCAAGAAGCAGGCCAAGCCCGCCGGAAGACCATTCGGGGGCCCACCCGGTGATCGTCCTAGGGGCCCACCTCGCTTTGACGGAGAGAGGAGATTTGGTGGTGATCGTGATGGTTACCGTGGAGGTCCCCGGGGGCCTGGTGGTGACTTTGGAGACAAGGGTGGAGCTCCTGCTGACTACAGGCCTTCTTTTGGGGGTCCTGGCGGAAGGCCTGGCTTCGGTCGTGGTGCTGGTGGTTATGGAGCACCAACTACTTTGAAGAGAACAATTAGCTCTTTTGCTAAAAGTTGCGATGAGTTGGAGATTGGAGAAAGCGACAGAGTTTGA 1572 0.4644 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKPSVTSSITTTQSVDQTQYNYNSNQLDHFVNQENITAKPPVQETLFSSTCPLFMFDTSSLDQETTTIDTNVRAELFHDSLGLSTEMWNLSRHQVHAFPPQPAVTFSAVMDTTNYLPPLIENMVPNIEVQSCSIDEEGEMALECLRRQELNEWVENQQECPSSFLFWDNVEGQLGGEELAPNTSNMGTNTLSPFPSSLASYVAVCTVATMIIPEKNRREICKYLFQEGVCYAKKDFNLAKHPDIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFDGERRFGGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGAPTTLKRTISSFAKSCDELEIGESDRV 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10477g00001 523 CDD SANT 69 112 IPR001005 -
Mupr10477g00001 523 PANTHER MYB DOMAIN PROTEIN 55 1 234 - -
Mupr10477g00001 523 Pfam Plectin/S10 domain 328 419 IPR005326 -
Mupr10477g00001 523 Gene3D - 6 66 - -
Mupr10477g00001 523 FunFam MYB transcription factor 6 66 - -
Mupr10477g00001 523 CDD SANT 17 61 IPR001005 -
Mupr10477g00001 523 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mupr10477g00001 523 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mupr10477g00001 523 FunFam Transcription factor MYB26 68 138 - -
Mupr10477g00001 523 Gene3D - 69 143 - -
Mupr10477g00001 523 SMART sant 66 114 IPR001005 -
Mupr10477g00001 523 SMART sant 13 63 IPR001005 -
Mupr10477g00001 523 MobiDBLite consensus disorder prediction 437 453 - -
Mupr10477g00001 523 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mupr10477g00001 523 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mupr10477g00001 523 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mupr10477g00001 523 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr10477g00001 523 Gene3D - 326 429 IPR036388 -
Mupr10477g00001 523 FunFam 40S ribosomal protein S10 326 429 - -
Mupr10477g00001 523 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr10477g00001 523 MobiDBLite consensus disorder prediction 418 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10477g00001 Mupr-Chr10477 2865 9665 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10477g00001 1 298 MYB Transcription Factor Family AT1G63910 52.235 1.47e-99 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr10477g00001 S10_plectin 3.6e-42 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10477g00001 K09422 K02947 gmx:100797787 783.867