Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10474g00001 ATGCATTACTGCAAGGCCATGGTGGGGTGGGGTGGGGAGGGGGAAGAACGGGCAGTGCTTTGTATTCCTGACCTGAGTATATCAAGCAGTGTCTTTACTGCCAGCATTATGGCTGTACATACAAAATTCCGTCTTATTGCTTACTCAGCAGAGATTGTAGATGGACAGCCTATTTTTGTTTCTTCGAACTGTCTTCCTATCAAGGCTTTGAAATATGAACCTGCAGGTCATGCTTTCCATTCTGCTGCACTTAAACTTCTTGGTGTTCAGGAAGATAACAATGATGCTGATAATAAAAAAGTGGTTGATGATAAGGAACAAACATCTTTGCCATCTGATTCTTATAGCAGCAAGAGCAAAAAGAAATCTGGTACTGGAGACAAGCAACAAGATCACTATGCATTATTGGGTCTGAGTCATCTAAGGTATCTTGCTACAGAGGATCAAATTCGTAAAAGCTATCGTGAAACTGCCTTGAGGTTTCATCCCGACAAGCAGGCTGCACTTCTTCTTGCTGAGGAAACGGAAGAAGCTAAACAAGCAAAGAAGGATGAAATAGAAAGTCACTTTAAGGCAATCCAGGAAGCGTATGAAGTGTTGGTTGATCCCGTGAAGAGAAGAATATATGATTCCACAGATGAGTTTGATGATGAGATTCCCACTGATTGTGCTCCACAAGACTTCTTCAAGGTGTTTGGTCCTGCTTTTATGAGGAATGGGCGGTGGTCAGTTACTCAACCAATTCCATCCCTAGGTGATGATAATACTTCATTAAAAGAAGTTGATAACTTCTACAATTTTTGGTACTCCTTTAAAAGCTGGAGGGAGTTTCCTCATGCTGATGAGTTTGATCTTGAGCAAGCTGAATCTCGAGACCACAAGAGGTGGATGGAAAGGCAGAATGCAAAATTGACTGAAAAAGCTAGGAAGGAAGACTATGCACGGATACGCACTCTTGTTGATAATGCTTATAAGAGAGACCCCAGAATATTGAGAAGAAAGGAAGAAGAAAAAGCTGAGAAACAAAGGAAAAAGGAGGCCAAGTTCCTGGCAAAGAAGTTGCAGGAAGAAGAAGCAGCCAGAATTGCAGAAGAGGAGAGGCAACGAAAAGAGGAGGAAGAGAGACAAGCTGCAGAGGCTGCTTTACAACAGAAGAAGGTGAAAGAGAAAGAGAAAAAGCTCATGCGGAAGGAGCGAGCACGTCTTCGGACTCTTTCAGGACCTATTTTATCACAGCATTTGCTTGATATTTCTGATGATGATGTAGAAAGGCTTTGCATGTCACTTGATATTGAGCAGCTGAGGAGTCTGTGTGAGAATATGGAAGGCAGACAGGTGTTATTAGAGAAAGCAAAAGATTTGAGAGATGCGCTGAGTTCTAAGAAAGAGGTGGTTGATGAGAAAACTAGTCAACAAAAAGCCAATGGTGGTTCTTCCATCAAGACTAATGGTACTGCTTCACTAAGCAACATTGAGAAGAAGGAGAAACCTTGGAATAAAGAAGAGATTGATCTGTTGAGGAAAGGAATGCTGAAATATCCCAAAGGAACTTCGCGGAGATGGGAGGTTATTTCAGAATACATTGGTACTGGAAGATCTGTTGAAGAAATTATGAAGGCAACTAAAACTGTACTCCTCCAGAAACCTGATTCATCAAAAGCTTTTGACACATTTCTGGAGAAAAGGAAGCCTGGTGCACAATCAATTGAGTCTCCACTGACAACCAGAGAAGAATTAGAAGGGGTATCAACTCCTGCCTCCTCCACAACAAATAACACAGAAGATTCTCATAGTAAAAGTGCAGATAATCAGAACTCTACCACTGCTAATGGAGTTTCTTCCACTTCAGAACAGGATGTCTGGTCTGCAGTGCAGGAACGAGCACTGGTTCAAGCTTTAAAAGCCTTTCCAAAGGAAACAAACCAGAGATGGGAGCGAGTTGCAGCAGCTGTACCTGGGAAGACTGTGAATCAGTGTAAGAAAAAATTTGCATTGATGAAGGAGAGTTTCAGGAACAAGAAAAGTGCAGTCTAA 2034 0.4199 MHYCKAMVGWGGEGEERAVLCIPDLSISSSVFTASIMAVHTKFRLIAYSAEIVDGQPIFVSSNCLPIKALKYEPAGHAFHSAALKLLGVQEDNNDADNKKVVDDKEQTSLPSDSYSSKSKKKSGTGDKQQDHYALLGLSHLRYLATEDQIRKSYRETALRFHPDKQAALLLAEETEEAKQAKKDEIESHFKAIQEAYEVLVDPVKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVTQPIPSLGDDNTSLKEVDNFYNFWYSFKSWREFPHADEFDLEQAESRDHKRWMERQNAKLTEKARKEDYARIRTLVDNAYKRDPRILRRKEEEKAEKQRKKEAKFLAKKLQEEEAARIAEEERQRKEEEERQAAEAALQQKKVKEKEKKLMRKERARLRTLSGPILSQHLLDISDDDVERLCMSLDIEQLRSLCENMEGRQVLLEKAKDLRDALSSKKEVVDEKTSQQKANGGSSIKTNGTASLSNIEKKEKPWNKEEIDLLRKGMLKYPKGTSRRWEVISEYIGTGRSVEEIMKATKTVLLQKPDSSKAFDTFLEKRKPGAQSIESPLTTREELEGVSTPASSTTNNTEDSHSKSADNQNSTTANGVSSTSEQDVWSAVQERALVQALKAFPKETNQRWERVAAAVPGKTVNQCKKKFALMKESFRNKKSAV 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10474g00001 677 Gene3D DnaJ domain 114 223 IPR036869 -
Mupr10474g00001 677 SUPERFAMILY Homeodomain-like 619 674 IPR009057 -
Mupr10474g00001 677 Gene3D - 611 677 - -
Mupr10474g00001 677 ProSitePatterns Nt-dnaJ domain signature. 190 209 IPR018253 -
Mupr10474g00001 677 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 38 676 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Mupr10474g00001 677 SMART dnaj_3 130 205 IPR001623 -
Mupr10474g00001 677 MobiDBLite consensus disorder prediction 459 484 - -
Mupr10474g00001 677 PRINTS DnaJ domain signature 154 169 IPR001623 -
Mupr10474g00001 677 PRINTS DnaJ domain signature 185 205 IPR001623 -
Mupr10474g00001 677 PRINTS DnaJ domain signature 84 102 IPR001623 -
Mupr10474g00001 677 ProSiteProfiles Myb-like domain profile. 490 545 IPR001005 -
Mupr10474g00001 677 ProSiteProfiles dnaJ domain profile. 131 213 IPR001623 -
Mupr10474g00001 677 Coils Coil 448 468 - -
Mupr10474g00001 677 Gene3D - 490 548 - -
Mupr10474g00001 677 SUPERFAMILY Chaperone J-domain 122 209 IPR036869 -
Mupr10474g00001 677 SMART sant 617 669 IPR001005 -
Mupr10474g00001 677 SMART sant 494 547 IPR001005 -
Mupr10474g00001 677 MobiDBLite consensus disorder prediction 470 484 - -
Mupr10474g00001 677 SUPERFAMILY Homeodomain-like 490 539 IPR009057 -
Mupr10474g00001 677 ProSiteProfiles Myb-like domain profile. 613 663 IPR001005 -
Mupr10474g00001 677 CDD SANT 621 667 IPR001005 -
Mupr10474g00001 677 MobiDBLite consensus disorder prediction 568 619 - -
Mupr10474g00001 677 Pfam Myb-like DNA-binding domain 620 663 IPR001005 -
Mupr10474g00001 677 CDD DnaJ 131 202 IPR001623 -
Mupr10474g00001 677 FunFam Myb family transcription factor 615 675 - -
Mupr10474g00001 677 Coils Coil 337 400 - -
Mupr10474g00001 677 Coils Coil 172 192 - -
Mupr10474g00001 677 CDD SANT 497 539 IPR001005 -
Mupr10474g00001 677 MobiDBLite consensus disorder prediction 365 393 - -
Mupr10474g00001 677 Pfam DnaJ domain 131 210 IPR001623 -
Mupr10474g00001 677 MobiDBLite consensus disorder prediction 558 619 - -
Mupr10474g00001 677 MobiDBLite consensus disorder prediction 95 128 - -
Mupr10474g00001 677 ProSiteProfiles SANT domain profile. 616 671 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10474g00001 Mupr-Chr10474 5138 8304 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10474g00001 132 331 C2H2 Transcription Factor Family AT1G74250 28.452 1.20e-17 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr10474g00001 DnaJ 3.6e-17 CL0392