Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10448g00009 ATGGTGAGTGGCGAGCAGAACCTGGCAAGCCCAAGCCCAAGCCCAACAGCAACAGCAACAACAGGCGTTTCCGATCCAAGCCTGTCGAAGACTCACATCTCTCCCTCACGCCGCTCCACAGCCAGCAGATCCAGGAGGAAAACTGTTAACCTTCTTCGCCCATTTGACTTCAATGATCACTGTTCCAATACCAATAGTCCCTACTACAAGGGTCTCACTGACCAATCCCTTGCCATTCTGGGTTCCTACCCTCATCCTCAGCCTTATTCTCCTTCCACTTATCTCCTTTCTCTTTCTAGTAGTCCCTATTATAAAGGTCTTACTGATTATTCCAAAGTCCTTTCTCCTTGGTCCCCTCACACTCCTATTCATCCCCTTTCCTATCAGTCTAGTCCATACTATAGTGGTCTTCTCACTGATTACTCCTTTTCCATTTATGCACCACCTAGGGATGGTGGACAGTCTTCTTCATCACCGCCAAACATCAACTCTTTTACTGACTTCATCGTCCATGGTAATGCATCACAACAAATTTCTCTCCAAGAAGAGAAGCCATTGAGAGTTAATGAATCAGAGGCAATTGAGTCTGTATTGCATGAAACTATTTTGGATGATGTCTTGATGTGTGATCAAGAGAAGCCATTGAGGGAGAGAGTATCAGAACCACAATGTAAAGAGGAACCAAATGAATATGTCTACCACTATACATGGGCAACCAAATACCAGCCCATTGCCTTGTCAGACTTCATCTGCAACAAAGATAAAGCACTTCAGCTCAAAGAAATGGTGAAAGAGGGGTGTGGTTGCAATCATTTTATATTTGAAGGACCACCAAGTGTAGGAAAGAGATCCATGATACGGGCTATGCTTCGAGAGGTATTTGGCGCCGACAGGGTGCAGGTCACAGAAGAATATAAAAACTTCTATTTGAAGTTTCTTCAACACGATGGAGAAATGGTTGATAATCTCCAAGTGCGGTTGAAGAAATCACTCCATCATGTTGAGGTGAATATCTCAGAGACAAAGGGATATGAAAAGCATGTAATTGTTGATTTATTCAAGGAAACATATGGCCAGGTCATAAATAACACGCAGCCTTGTCAGCCAGAAAACTGCAAAGCAATAATTTTGTACGAGGCCGAGAAGCTATCCATAGAATCCTTGTTGTATATTAAGTGGCTACTAGAAAAGTATAAAGGGTGTAATAAGGTTTTCTTTTGTTGCTCCGATGAATCAAAGCTCCAACCTGTGAAGCCACTTTGCGTCACTATCCGCCTTTCATCACCATCAACACAAGAGGTTTTTGATAACAAGGTTTTAATGTTTTCCATGCCTTTGAGCCAACAGCTTGTTAACATTTTGGAATATATCGGAAAAGAAGAAGGGATCAAATTATCACGCAACTCAGTCGACAAGATAATTTTTATGTCCAACAACAATCAACGCCAAGCCATTCGTTCGTTCGAGGCCACTTGCCGAAACAAGGATGCTCTCAAAGACGACGATTTAATTCTAACTGGGTGGGAAGAAGATATTTTGAATATTGCCAAAAAAATAACCCAAGAGCAAAGTCCACGACAGTAA 1584 0.423 MVSGEQNLASPSPSPTATATTGVSDPSLSKTHISPSRRSTASRSRRKTVNLLRPFDFNDHCSNTNSPYYKGLTDQSLAILGSYPHPQPYSPSTYLLSLSSSPYYKGLTDYSKVLSPWSPHTPIHPLSYQSSPYYSGLLTDYSFSIYAPPRDGGQSSSSPPNINSFTDFIVHGNASQQISLQEEKPLRVNESEAIESVLHETILDDVLMCDQEKPLRERVSEPQCKEEPNEYVYHYTWATKYQPIALSDFICNKDKALQLKEMVKEGCGCNHFIFEGPPSVGKRSMIRAMLREVFGADRVQVTEEYKNFYLKFLQHDGEMVDNLQVRLKKSLHHVEVNISETKGYEKHVIVDLFKETYGQVINNTQPCQPENCKAIILYEAEKLSIESLLYIKWLLEKYKGCNKVFFCCSDESKLQPVKPLCVTIRLSSPSTQEVFDNKVLMFSMPLSQQLVNILEYIGKEEGIKLSRNSVDKIIFMSNNNQRQAIRSFEATCRNKDALKDDDLILTGWEEDILNIAKKITQEQSPRQ 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10448g00009 527 MobiDBLite consensus disorder prediction 1 47 - -
Mupr10448g00009 527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 234 502 IPR027417 -
Mupr10448g00009 527 MobiDBLite consensus disorder prediction 1 38 - -
Mupr10448g00009 527 Gene3D - 235 429 IPR027417 -
Mupr10448g00009 527 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 236 526 - -
Mupr10448g00009 527 FunFam Replication factor C subunit 3 235 429 - -
Mupr10448g00009 527 Gene3D - 447 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10448g00009 Mupr-Chr10448 40399 42702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10448g00009 237 527 Core DNA Replication Machinery Family AT5G27740 27.891 8.26e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10448g00009 K10756 - gmx:102664389 589.726