Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10448g00005 ATGGTGGTTGGGCAAGTTGTTCTTCCTAATCCTTCCAATTTGTTCCTCAAAGCTACTGCCACTACACTCATACCCAGATGCCCACACGTTCTCTGTTTCGAAAGACTCAACACCCATAAAGTGAAGACTGTGCTCCACAGAAGCAAAGAGCAGAGGCGAGGAGGATGGGATTTGATTCCCAATTTTCCCTCTGAAAGCAAAGCAACCATTGACACCAACTTTTTCAGTGTTAAGTCTTTCAAAGAAATTGGGTGCAGTGACTATATCATTCAATCCCTCCAAAAACTCTTGTTCACACGCCCTTCCCATGTCCAGGCCATGGCATTTGCACCTATTATTAAGGGAAAGACTTGTGTCATAGCTGATCAAAGTGGTTCTGGAAAGACATTGGCTTATCTTGCACCAATCATTCAGCGTCTTAGACACGAAGAACTCCAAGGACTTAGTTATTCCTCTTCACAATCTCCCAGACTCCTTGTACTCGCACCCACTGCTGAGTTAGCTTCTCAGGTCTTTGATAATTGTCGATCCCTTTCAAAATCTGGTGTTCCATTCAAATCCATGATTGTCACCGGTGGTTTTCGACAAAGGACTCAACTCGAAAATTTGCAGCAGGGAGTTGATGTCTTAATAGCTACCCCTGGCCGTTTTTTGTTCCTCATTAAAGAAGGCTTCTTGCATGCTGTGTTGGATGAGGTAGATATACTCTTTGGTGATGAGGACTTCGAACTGGCTCTTCAATCCTTGATCAATTCTTCACCTGTGAACACACAGTATTTATTTGTAACTGCAACTTTACCAAAAAATATTTACAGCAAATTGGTTGAAGTTTTTCCCGATTGTGAAATGATTATGGGGCCTGGTATGCACCGAATAAGTTCTCGCCTTCAAGAGATTGTAGTGGATTGCAGTGGAGAAGATGGACAAGAAAAAACTCCTGATACAGCATTTTTGAACAAGAAAGATGCACTTCTGCAGCTTGTGGAGAAAAGCCCTGTCCCGAGAACGATTGTGTTCTGCAACAAAATTGAAACATGCAGAAAAGTTGAAAATTCATTGAAGCGTTTAGATAGAAAAGGAGATCGCGTGCAAGTTTTACCCTTCCATGCTGCCATGACACAAGAATCACGGCTTGCTAGTATGGAAGAGTTTACACGTTCTCCATCAAAAGGAGTGAACCAGTTTATGGTTTGCACAGACAGAGCATCACGGGGAATAGACTTCGCAGGAGTGGATCATGTCATACTCTTTGACTACCCACGCGATCCAAGTGAATATGTACGGCGTGTTGGAAGAACAGCCAGAGGTGCCAAGGGAGTGGGCAAGGCATTTATCTTTGTGGTTGGCAAGCAAGTATCCCTTGCACGCAAAATAATGGAAAGAAATCAGAAGGGTCACCCACTACATGATGTTCCTTCTGCTTATTAG 1428 0.4328 MVVGQVVLPNPSNLFLKATATTLIPRCPHVLCFERLNTHKVKTVLHRSKEQRRGGWDLIPNFPSESKATIDTNFFSVKSFKEIGCSDYIIQSLQKLLFTRPSHVQAMAFAPIIKGKTCVIADQSGSGKTLAYLAPIIQRLRHEELQGLSYSSSQSPRLLVLAPTAELASQVFDNCRSLSKSGVPFKSMIVTGGFRQRTQLENLQQGVDVLIATPGRFLFLIKEGFLHAVLDEVDILFGDEDFELALQSLINSSPVNTQYLFVTATLPKNIYSKLVEVFPDCEMIMGPGMHRISSRLQEIVVDCSGEDGQEKTPDTAFLNKKDALLQLVEKSPVPRTIVFCNKIETCRKVENSLKRLDRKGDRVQVLPFHAAMTQESRLASMEEFTRSPSKGVNQFMVCTDRASRGIDFAGVDHVILFDYPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLARKIMERNQKGHPLHDVPSAY 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10448g00005 475 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 109 284 IPR014001 -
Mupr10448g00005 475 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 323 475 IPR001650 -
Mupr10448g00005 475 Pfam Helicase conserved C-terminal domain 320 436 IPR001650 -
Mupr10448g00005 475 CDD DEADc 89 270 - -
Mupr10448g00005 475 SMART ultradead3 97 299 IPR014001 -
Mupr10448g00005 475 CDD SF2_C_DEAD 296 447 - -
Mupr10448g00005 475 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 61 473 - -
Mupr10448g00005 475 SMART helicmild6 347 437 IPR001650 -
Mupr10448g00005 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 448 IPR027417 -
Mupr10448g00005 475 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 78 106 IPR014014 GO:0003724
Mupr10448g00005 475 Pfam DEAD/DEAH box helicase 103 270 IPR011545 GO:0003676|GO:0005524
Mupr10448g00005 475 Gene3D - 310 472 IPR027417 -
Mupr10448g00005 475 Gene3D - 40 284 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10448g00005 Mupr-Chr10448 21794 24695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10448g00005 77 458 Eukaryotic Initiation Factors Gene Family AT3G19760 26.992 1.64e-29 117