Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10445g00001 ATGGTCTCGCCCCGAATTCCTCCTCTACGGCACTCATCTTCGTTCTTCATCTTTGTGAAGGCAGTTCATAACACTCAACCGAAGATGCAGAACGAGGAGGGACAGATCACCGAGCTTTACATTCCCAGGAACTCTGCTACAAACAGATTGATCACTGCGAAGGACCATGCGTCGGTTCAGATTAACATTGGGCATTTGGATGAGAATGGTATCTTCAATGGCCAATGCTCCACTTTTGCCCTCTGTGGCTTCATCCGTGCCCAGGGTGATGCTGACAGTGCACTAGATCGCTTGTGGCAGAAGAAGAAAACTGAGGCTAAGCAACAATTTGATTTAACAAAACAGAGAACACTTTGCTTAAGGTGTTCTATTGGCCATATGACGTGTGATCCTGATGAATGGCTTATTGGCAGATGGAGCTTCGCGTGCCCCAAAATTCCATGTGGACTTAGTGCATCGCGGCAGATCAAATTGGGAGATTGTGGGCTTCAACCGGGACTTGGTGGTGGTGCTAATTGGCTCATACTTCAATAA 534 0.4738 MVSPRIPPLRHSSSFFIFVKAVHNTQPKMQNEEGQITELYIPRNSATNRLITAKDHASVQINIGHLDENGIFNGQCSTFALCGFIRAQGDADSALDRLWQKKKTEAKQQFDLTKQRTLCLRCSIGHMTCDPDEWLIGRWSFACPKIPCGLSASRQIKLGDCGLQPGLGGGANWLILQ 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10445g00001 177 Gene3D - 25 109 IPR038579 -
Mupr10445g00001 177 Pfam Ribosomal protein S21e 29 103 IPR001931 GO:0003735|GO:0005840|GO:0006412
Mupr10445g00001 177 PANTHER 40S RIBOSOMAL PROTEIN S21 29 107 IPR001931 GO:0003735|GO:0005840|GO:0006412
Mupr10445g00001 177 FunFam 40S ribosomal protein S21 29 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10445g00001 Mupr-Chr10445 6596 9543 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10445g00001 29 108 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 81.481 4.20e-45 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10445g00001 K02971 - gmx:100817753 148.288