Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10424g00003 ATGGGAAACAATTGTATCGGATCGAAAACCTCGGAAGATGCACTATTTCCCTATGTTGTTCCAAGTTCATTCTGGTGGCTTCATCAAACGAGGGTCACAGACACAATAGAGAATGTTGAAGAAAAGCCTCCACAAGTAGTGAAAATTGAGAACAAGGAGATTAAACTTAAACCGAAGCCAGTTCCATGGAATACACCATCAGAGGAACAAATAAAAATGCCTCACAAAGTTAAGAGTGTGGCTGCTGGGTTTCAAGCAGAGTCAATTCTGAAGAGAAAAAGTGGACACTTTAAGGAGCACTACAACTTGGGAAAAGAGCTTGGGAAGGGACAATATGGAACAACATTCCTTTGCACTGAGAAATCAAGTGGGAAAAAGTACGCATGCAAGTCCATTCCAAAGGTGAAATTGGTTATAGATGATGACGTGGAGGATGTGAGGAGGGAGATTGATATAATGCATCACTTGGAAGGGTGTCCTAATGTGATATCTATTAAAGGGGCTTATGAGGATGGTGTTGCAGTTCATGTTGTGATGGAGTTGTGTGGAGGGGGTGAACTTTTTGATAGGATTGTGGAAAGGGGGCATTACACAGAGAGAAAAGCAGCTAAACTTGCAAGAACTGTGGTTAGTGTTATAGAGGCTTGTCACTCCCTTGGAGTCATGCATCGGGATCTTAAGCCTGAGAATTTTCTTTTTCTTGATGGGAGTGAAGAATCCACTCTTAAGGCTATAGATTTTGGATTGTCTGTTTTCTTCAAACCAGGAGACATTTTCAGGGAGGTGGTTGGTAGTCCTTATTATATGGCACCTGAAGTTCTACGAAGGCATTATGGTCCAGAAGCTGATGTGTGGAGTGCAGAATCGGAGCATGAGATATTTCAGGAGGTTTTGTATGGCGATCTTGATTTCTCTTCAGATCCTTGGTCAAATATCTCTGAGAGTGCTAAAGACTTGGTTAGGAAAATGCTTGTTAGAGATCCTAGAAAACGGATAACAGCACATGAAGTTCTTCGTCACCCTTGGATTCAGGTTGATGGAGTTGCTCCAGACAAGCCTCTTGATTCTGCAGTTTTGAGTCGCCTGAAGCAGTTTTCTGTAATGAACAAGCTCAAGAAAATGGCTCTTAGAGTTATTGCAGAGAATCTCTCAGAAGAAGAAATTTCTGAATTGAAAGTAATATTTAAGATGATAGACACAGACAACAGTGGTCAGATTACTTTAGAAAAACTCAAGGTTGGATTGAAAATGCTTGGTGCTACTCTCGGTGAACCTGAAATTTTGGATCTAATGCAAGCCGCAGATGTTAATAATAGTGGCACAATTGACTATGGAGAATTCATAGCTGCAACATTGCATTTAAACAAAGTTGACAGAGAAGATCATTTAGTTGCAGCTTTTTCATATTTTGATAGAAGTGGAAGTGGCTACATCACTCAAGATGAGCTTCAAAAAGCTTGTGAGGAATTTGGCATGGAGAATGTCTGCTTGGAGGAAATGATCCAAGAAGCTGATCAGAATAATGATGGCCGAATAGACTACAATGAATTTGTGGATATGATGCAAAGAGGCAATGCAGATTTAGGTAAAAACGGTTTAAAGGGTGGCACTGATTTTAGCATTGGATTTAGGGAGGCACTATCAGTGTGTTAA 1653 0.4053 MGNNCIGSKTSEDALFPYVVPSSFWWLHQTRVTDTIENVEEKPPQVVKIENKEIKLKPKPVPWNTPSEEQIKMPHKVKSVAAGFQAESILKRKSGHFKEHYNLGKELGKGQYGTTFLCTEKSSGKKYACKSIPKVKLVIDDDVEDVRREIDIMHHLEGCPNVISIKGAYEDGVAVHVVMELCGGGELFDRIVERGHYTERKAAKLARTVVSVIEACHSLGVMHRDLKPENFLFLDGSEESTLKAIDFGLSVFFKPGDIFREVVGSPYYMAPEVLRRHYGPEADVWSAESEHEIFQEVLYGDLDFSSDPWSNISESAKDLVRKMLVRDPRKRITAHEVLRHPWIQVDGVAPDKPLDSAVLSRLKQFSVMNKLKKMALRVIAENLSEEEISELKVIFKMIDTDNSGQITLEKLKVGLKMLGATLGEPEILDLMQAADVNNSGTIDYGEFIAATLHLNKVDREDHLVAAFSYFDRSGSGYITQDELQKACEEFGMENVCLEEMIQEADQNNDGRIDYNEFVDMMQRGNADLGKNGLKGGTDFSIGFREALSVC 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10424g00003 550 FunFam Calcium-dependent protein kinase 5 187 351 - -
Mupr10424g00003 550 CDD EFh 390 450 IPR002048 GO:0005509
Mupr10424g00003 550 FunFam Calcium-dependent protein kinase 1 351 525 - -
Mupr10424g00003 550 FunFam Calcium-dependent protein kinase 1 isoform A 103 186 - -
Mupr10424g00003 550 ProSiteProfiles Protein kinase domain profile. 101 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10424g00003 550 ProSitePatterns EF-hand calcium-binding domain. 435 447 IPR018247 -
Mupr10424g00003 550 ProSitePatterns EF-hand calcium-binding domain. 471 483 IPR018247 -
Mupr10424g00003 550 ProSiteProfiles EF-hand calcium-binding domain profile. 458 493 IPR002048 GO:0005509
Mupr10424g00003 550 SUPERFAMILY EF-hand 372 523 IPR011992 -
Mupr10424g00003 550 Gene3D Phosphorylase Kinase; domain 1 80 176 - -
Mupr10424g00003 550 SMART efh_1 390 418 IPR002048 GO:0005509
Mupr10424g00003 550 SMART efh_1 462 490 IPR002048 GO:0005509
Mupr10424g00003 550 SMART efh_1 426 454 IPR002048 GO:0005509
Mupr10424g00003 550 SMART efh_1 496 524 IPR002048 GO:0005509
Mupr10424g00003 550 PANTHER SERINE/THREONINE-PROTEIN KINASE 91 517 - -
Mupr10424g00003 550 Gene3D - 350 526 - -
Mupr10424g00003 550 Gene3D Transferase(Phosphotransferase) domain 1 177 349 - -
Mupr10424g00003 550 CDD EFh 462 522 IPR002048 GO:0005509
Mupr10424g00003 550 ProSiteProfiles EF-hand calcium-binding domain profile. 386 421 IPR002048 GO:0005509
Mupr10424g00003 550 Pfam EF-hand domain pair 462 522 IPR002048 GO:0005509
Mupr10424g00003 550 Pfam EF-hand domain pair 390 451 IPR002048 GO:0005509
Mupr10424g00003 550 SMART serkin_6 101 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10424g00003 550 Pfam Protein kinase domain 101 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10424g00003 550 ProSiteProfiles EF-hand calcium-binding domain profile. 497 527 IPR002048 GO:0005509
Mupr10424g00003 550 ProSitePatterns EF-hand calcium-binding domain. 505 517 IPR018247 -
Mupr10424g00003 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Mupr10424g00003 550 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Mupr10424g00003 550 SUPERFAMILY Protein kinase-like (PK-like) 99 344 IPR011009 -
Mupr10424g00003 550 CDD STKc_CAMK 100 342 - -
Mupr10424g00003 550 ProSiteProfiles EF-hand calcium-binding domain profile. 422 457 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10424g00003 Mupr-Chr10424 12285 16223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10424g00003 28 544 EF-hand Containing Proteins AT5G04870 65.854 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mupr10424g00003 Pkinase 4.4e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10424g00003 K13412 - gmx:100814475 950.658