Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10411g00001 ATGACGCGCGTAGATGACTCTGAAAGACTTTCGACTTTGGTTCCTGTGATGGAATTCGTGGATTCTTCATTATACTTCTCAAAATTCAATCCCATATGGACATACGACGTGTTTATCACTTTTAGGGGGAAGGACACTCGTGCGAAATTCGTTTCTCATCTCCATTCTTCCCTCTCAAAAGCTGGAGTCAACACTTTCCTGGACGATGACAACTTTCCCAGGGGAATAGGTCTGACAGAAGGACTACTAGCAGCGATAGAAGGATCTCGAATATGTGTTGTTGTTTTCTCCACACACTATACTGAATCCACTTGGTGTCTAAAGGAGTTGGAAAAAATCATTGAATGCCACAAAACTTATGGGCAGTTAGTTGTGCCCATATTTTACCATGTTGACCCATCCCATGTACGTCATCAAACGGGTGATTTTGGAGAAGTTTTGAAAGCATTTGCAGAAAAAAGATTTTGGGATAAATCTGTGTTGTCGAGGTGGGGGAGCGTACTCACTGAAGCTGCAAATTTCTCTGGTTGGGATGTCAGCAATCACACAAGGAGTGAAGCAAAACTAATTAAGGAAATTGTTGAGGACATTCTCCGAAAACTAGACAACACACTCTTGTCTATTACTGAATTTCCTGTTGGATTAGAATCCCGTATCCAAGAAGTGATTCGATTTGTTGAAAATCGATCCACCAAAGTTTGTATCCTAGGGATATGGGGAATGGGAGGATCGGGTAAAACTACCACAGCCAAAGCCATCTACAATCAAATTCATCATAGATTCTTGGGTAGAAGTTTTATTGAAAATATTCGAGAAGTTTGTGAAACAGATTGTAGAGGGCATGCTCATTTACAAGAACAACTTCTTTCCGATCTCCTAAAAACAAATGTGAAGATACATAGCGTTGGGATGGGAACAGCTATGATCGAGAACAGACTTGCTGGAAAAAAAAAGGTACTCATTATACTTGATGATGTGAATGAGTTTGGCCAATTGAAAAACCTATGTGGAAATCGTAGATGGTTTGGTGAAGGAAGTATGGTAATTATTACAACAAGAGATTTACGCCTACTTACCAGACTTAAAGTTGATTATGTTTATGAGATGGATAAAATGGACCAAAATGAGTCCCTTGAGCTTTTT 1143 0.3963 MTRVDDSERLSTLVPVMEFVDSSLYFSKFNPIWTYDVFITFRGKDTRAKFVSHLHSSLSKAGVNTFLDDDNFPRGIGLTEGLLAAIEGSRICVVVFSTHYTESTWCLKELEKIIECHKTYGQLVVPIFYHVDPSHVRHQTGDFGEVLKAFAEKRFWDKSVLSRWGSVLTEAANFSGWDVSNHTRSEAKLIKEIVEDILRKLDNTLLSITEFPVGLESRIQEVIRFVENRSTKVCILGIWGMGGSGKTTTAKAIYNQIHHRFLGRSFIENIREVCETDCRGHAHLQEQLLSDLLKTNVKIHSVGMGTAMIENRLAGKKKVLIILDDVNEFGQLKNLCGNRRWFGEGSMVIITTRDLRLLTRLKVDYVYEMDKMDQNESLELF 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10411g00001 381 FunFam Disease resistance protein (TIR-NBS-LRR class) 31 203 - -
Mupr10411g00001 381 Gene3D - 31 205 IPR035897 -
Mupr10411g00001 381 ProSiteProfiles TIR domain profile. 33 201 IPR000157 GO:0007165
Mupr10411g00001 381 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 35 381 IPR044974 GO:0006952
Mupr10411g00001 381 Pfam NB-ARC domain 219 381 IPR002182 GO:0043531
Mupr10411g00001 381 Gene3D - 206 366 IPR027417 -
Mupr10411g00001 381 PRINTS Disease resistance protein signature 235 250 - -
Mupr10411g00001 381 PRINTS Disease resistance protein signature 313 327 - -
Mupr10411g00001 381 Pfam TIR domain 35 209 IPR000157 GO:0007165
Mupr10411g00001 381 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 381 IPR027417 -
Mupr10411g00001 381 SMART till_3 34 174 IPR000157 GO:0007165
Mupr10411g00001 381 SUPERFAMILY Toll/Interleukin receptor TIR domain 32 177 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10411g00001 Mupr-Chr10411 51 1731 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10411g00001 26 381 WRKY Transcription Factor Family AT4G12020 28.134 1.50e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10411g00001 - - gmx:100813173 525.013