Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10409g00005 ATGGCAGCCACATGGCAACTGAACGTGAATGATTCACCCACTCGAGGATCCAGAGGTGTTGATTGCTTCGAGAAGTTGGAGCAAATTGGCGAGGGCACATATGGTCAGGTTTACATGGCTAAAGAGATCAAAACTGGTGAAATTGTTGCTCTGAAGAAAATACGAATGGACAATGAGAGAGAGGGGTTTCCTATAACTGCTATACGAGAAATCAAAATTCTAAAGAAACTACACCATGAAAATGTGATCAAGCTGAGAGAAATTGTGACTTCTCCAGGTTCTTTTCAAGATCTAAATGTCCTGAGAAAGATGAACAGGGGAGGCCAGGCGAATGGTAGAAAATATAAAGGTGGCATCTATATGGTCTTTGAATACATGGACCATGATTTAACAGGTCTTGCTGACCGACCTGGGATGAGATTTACAGTTCCCCAAATTAAGTGTTACATGAGACAGCTTTTGACGGGGCTTCACTATTGTCATGTAAATCAAGTACTTCATCGTGATATCAAAGGCTCAAATCTTCTTATAGACAATGAAGGAAATCTTAAGCTTGCAGATTTTGGACTGGCACGATCATTTTCTAACGACCAAAATGCAAATCTTACAAATCGTGTCATTACATTATGGTACAGACCACCTGAGTTGCTGCTAGGGACAACAAAGTATGGACCAGCTGTAGATATGTGGTCTGTTGGGTGCATTTTTGCTGAGCTTCTTCAAGGGAAGCCTATCTTTCCTGGAAAAGATGAGAGCAGAGCAAAGCTCTGCCTGTGCTCACAACTGAGGGCCATCGCCGTCTGCCGTGCCGCCATCGCCGTCTGCCGCTGCCATCCGCCGCCGCTGTCTACCATTGTTTGTCGTCGCCGTTCTGTTCGTTGGCCTCTTTCCTGCCTACTCCAACGTTCAGAACCTTGGTTGGGA 924 0.4491 MAATWQLNVNDSPTRGSRGVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLREIVTSPGSFQDLNVLRKMNRGGQANGRKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDQNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLQGKPIFPGKDESRAKLCLCSQLRAIAVCRAAIAVCRCHPPPLSTIVCRRRSVRWPLSCLLQRSEPWLG 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10409g00005 308 PANTHER CELL DIVISION PROTEIN KINASE 21 253 - -
Mupr10409g00005 308 Gene3D Phosphorylase Kinase; domain 1 12 127 - -
Mupr10409g00005 308 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Mupr10409g00005 308 Pfam Protein kinase domain 23 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10409g00005 308 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Mupr10409g00005 308 FunFam Cyclin-dependent kinase C-2 10 127 - -
Mupr10409g00005 308 CDD STKc_CDK9_like 23 265 - -
Mupr10409g00005 308 SUPERFAMILY Protein kinase-like (PK-like) 20 261 IPR011009 -
Mupr10409g00005 308 Gene3D Transferase(Phosphotransferase) domain 1 128 289 - -
Mupr10409g00005 308 SMART serkin_6 23 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10409g00005 308 ProSiteProfiles Protein kinase domain profile. 23 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10409g00005 308 FunFam Mitogen-activated protein kinase 126 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10409g00005 Mupr-Chr10409 34778 37932 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10409g00005 1 251 Core Cell Cycle Gene Families AT5G10270 82.540 3.49e-149 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mupr10409g00005 Pkinase 1.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10409g00005 K08819 - gmx:100795971 452.595