Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10409g00001 ATGTGCACATTGCCACATGGAGGAGAAAACAGTGACAAAGATCAGGCAGTAGAAGAGAGTGGTTTTAAGAAAGGGCCATGGACACGAGAAGAGGATGAAGTCTTGGCATCATATGTGTCAATCCACGGAGTGGGAAATTGGAATATAGTGCAAAAGAACACTGGACTTGCTCGTTGTGGAAAAAGTTGTCGTTTAAGGTGGACAAATCATCTCAGACCAGATTTGAAAAGAGGTGCATTTTCTGACGAAGAACAACGTAAAGTTATTGAGCTTCATGCTTCGCTGGGAAGTAAATGGGCCAAAATGGCCCAGGAGTTACCAGGACGCACGGATAATGAAATAAAGAACTTTTGGAATACAAGATTAAAGAAGAGGAGACGATTGGGTTTACCAGTGTATCCTGATGACATAAAACCAATGTTGAACGACTCAGAAGCATTTCCATTACCAGAGTTGATATTCGACGATTGCAACTTCGACCTTGAACGCGAAACATTGTGTATGCCATCTACTTCTTTTGGGCCTGAAAACAGTATCTTTGAACAGCAAATTTCGGATAACCCAATTATGCATCATCCGAAACCCATTTCTATTGTGCCTGAAAACAGTATCTTTGAACAGCAAATTTCGGATAATCCAATTATGCATCATCCGAAACCCATTTCTATTGTGCCTGAAAAC 681 0.4097 MCTLPHGGENSDKDQAVEESGFKKGPWTREEDEVLASYVSIHGVGNWNIVQKNTGLARCGKSCRLRWTNHLRPDLKRGAFSDEEQRKVIELHASLGSKWAKMAQELPGRTDNEIKNFWNTRLKKRRRLGLPVYPDDIKPMLNDSEAFPLPELIFDDCNFDLERETLCMPSTSFGPENSIFEQQISDNPIMHHPKPISIVPENSIFEQQISDNPIMHHPKPISIVPEN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10409g00001 227 Gene3D - 79 125 - -
Mupr10409g00001 227 Gene3D - 23 76 - -
Mupr10409g00001 227 FunFam MYB-related transcription factor 23 76 - -
Mupr10409g00001 227 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Mupr10409g00001 227 SMART sant 76 124 IPR001005 -
Mupr10409g00001 227 SMART sant 23 73 IPR001005 -
Mupr10409g00001 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 126 IPR017930 -
Mupr10409g00001 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 71 IPR017930 -
Mupr10409g00001 227 MobiDBLite consensus disorder prediction 1 24 - -
Mupr10409g00001 227 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 11 182 - -
Mupr10409g00001 227 CDD SANT 79 122 IPR001005 -
Mupr10409g00001 227 Pfam Myb-like DNA-binding domain 27 87 - -
Mupr10409g00001 227 SUPERFAMILY Homeodomain-like 22 118 IPR009057 -
Mupr10409g00001 227 CDD SANT 26 71 IPR001005 -
Mupr10409g00001 227 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10409g00001 Mupr-Chr10409 33 987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10409g00001 11 138 MYB Transcription Factor Family AT2G26960 69.531 7.89e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr10409g00001 Myb_DNA-bind_6 2.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10409g00001 K09422 - ccaj:109791291 251.521