Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10395g00005 ATGGTTTCCGGGTCCGGTATCTGCGCGAAGAGGGTGGTGGTGGATGCTCGCCACCATATGCTGGGAAGGCTGGCCTCCATCGTGGCCAAGGAGCTTCTGAACGGACAGAAGGTGGTCGTCGTGAGGTGTGAGGAGATTTGCATCTCCGGCGGCCTCGTCAGGCAGAAGATGAAGTACATGCGTTTCCTCCGCAAGCGCATGAACACCAAGCCCTCTCACGGTCCCATTCACTTCCGCGCCCCCGCTAAGATCTTCTGGCGCACCCTTCGCGGAATGATACCGCATAAGACAAAGCGTGGGGAAGCTGCACTTGCTCGATTGAAGGTCTATGAGGGCATTCCTCCTCCTTATGACAAGACAAAGAGAATGGTTGTCCCTGATGCTCTCAAGGTTTTGAGGCTTCAGAAGGGACACAAGTACTGTCTTCTGGGCCAATTGTCATCTGAGGTTGGATGGAACTACTATGACACTATCAGGGAACTGGAAAAGAAGAGGAAGGAAAGGGCACAGCTGTCTTATGAGAGGAAGAAGCAACTTGCAAAGTTGAGGGTTAAAGCTGAGAAGGTCGCAGATGAGAAGCTTGGTTCCCAAATTGAAGTCCTTGCTCCTGTTAAGCAATTTCGTTTCCAAGGCTTGGGCCGTGAGTCGGGACAACTGACAAGGTTCCTAGATTCTAGTAAGGATGCAGCAACACAACTACAAATGCCTAGACGCAAGGCTTCATTGACTTTGTAG 735 0.5156 MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTLRGMIPHKTKRGEAALARLKVYEGIPPPYDKTKRMVVPDALKVLRLQKGHKYCLLGQLSSEVGWNYYDTIRELEKKRKERAQLSYERKKQLAKLRVKAEKVADEKLGSQIEVLAPVKQFRFQGLGRESGQLTRFLDSSKDAATQLQMPRRKASLTL 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10395g00005 244 SUPERFAMILY Ribosomal protein L13 12 154 IPR036899 GO:0003735|GO:0005840|GO:0006412
Mupr10395g00005 244 FunFam 60S ribosomal protein L13a 155 206 - -
Mupr10395g00005 244 ProSitePatterns Ribosomal protein L13 signature. 89 112 IPR023563 GO:0003735|GO:0005840|GO:0006412
Mupr10395g00005 244 Gene3D - 156 206 - -
Mupr10395g00005 244 FunFam 60S ribosomal protein L13a-4 8 154 - -
Mupr10395g00005 244 Hamap 50S ribosomal protein L13 [rplM]. 11 135 IPR005822 GO:0003735|GO:0005840|GO:0006412
Mupr10395g00005 244 PANTHER RIBOSOMAL PROTEIN L13 1 188 IPR005822 GO:0003735|GO:0005840|GO:0006412
Mupr10395g00005 244 CDD Ribosomal_L13 12 113 IPR005822 GO:0003735|GO:0005840|GO:0006412
Mupr10395g00005 244 Pfam Ribosomal protein L13 10 115 IPR005822 GO:0003735|GO:0005840|GO:0006412
Mupr10395g00005 244 NCBIfam 50S ribosomal protein L13 12 154 IPR005755 GO:0003735|GO:0006412|GO:0015934
Mupr10395g00005 244 Gene3D Ribosomal protein L13 8 154 IPR036899 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10395g00005 Mupr-Chr10395 32406 35519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10395g00005 1 205 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 87.805 5.48e-137 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10395g00005 K02872 - gmx:100784830 400.208