LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr10393g00001	ATGAAGTATATTCGGAGCAACAGCTTAAAGAGGCTCTTCTCGTTCGGAAGACGCGGCTTTGCGGAAGAAAACGATGTTGGGTTGGTGGTTCCTCCTTGTGAAGAGCACCCTCCAAGACCCTCTTGGAAATGCTTCTCTTATGATGAGTTGTTTCATGCCACCAATGGCTTTAGCTCAGGGAATTTTGTGGGGAAAGGAGGGTATGCTGAAGTTTATAAGGGAAGGTTGAGTGGTGGTGAGGAAATTGCGGTGAAGAGGCTCACGAGAACTTCAACGGATGAGAGGAAGGAGAAGGAGTTTCTGATAGAGATTGGAACAATTGGTCACGTGCGCCATTCAAACGTGTTGCCTCTTCTGGGGTGTTGTATTGACAATGGACTTTACCTCGTTTTTGAGCTATCCACCGTTGGTTCTGTTGCTTCTCTTATTCATGATGAGAACTTGCCTCCTTTGGATTGGAAAACAAGGTATAAGATAGTTCTTGGGACCGCACGTGGTCTTCACTACTTGCACAAAGGCTGCAAGAGGAGGATAATTCACAGGGACATCAAGGCCTCAAACATTTTGTTGACAGCAGATTTTGAACCAAAGATATCTGATTTTGGACTAGCAAGGTGGCTACCATCTGAGTGGACTCACCATTCAATAGCCCCAATAGAAGGAACATTTGGGCATTTGGCACCTGAGTACTATATGCATGGAATTGTGGATGAGAAGACAGATGTATTTGCCTTTGGTGTGTTCTTGCTTGAAGTCATCTCTGGGAGGAAACCGGTGGATGGCTCTCACCAAAGCTTGCACAGCTGGGTAGCTAAACCAATACTAAACAAGGGAGAGATAGAAAAGGTGGTAGATCCAAGGCTTGGAGGGGCTTATGATGTGACACAGTTTAATAGACTAGCCTTTGCTGCCTCCCTCTGCATCCGGGCATCTGCAACTTGGCGACCTACCATGAGTGAGGTACTGCAGGTAATGGAGGAGTGGGAGGTGGATAAAGAGAAGTGGGAAATGGCAGAAGAAGAAGAGCAAGAGGAGGAATTATGGGGTTTTGAGGATCTTGAATATGCATATGATAGTTCCTTTTCAGTGTCCCTACCTGACTGTTGGAATTCCTTAGGGTAA	1122	0.4599	MKYIRSNSLKRLFSFGRRGFAEENDVGLVVPPCEEHPPRPSWKCFSYDELFHATNGFSSGNFVGKGGYAEVYKGRLSGGEEIAVKRLTRTSTDERKEKEFLIEIGTIGHVRHSNVLPLLGCCIDNGLYLVFELSTVGSVASLIHDENLPPLDWKTRYKIVLGTARGLHYLHKGCKRRIIHRDIKASNILLTADFEPKISDFGLARWLPSEWTHHSIAPIEGTFGHLAPEYYMHGIVDEKTDVFAFGVFLLEVISGRKPVDGSHQSLHSWVAKPILNKGEIEKVVDPRLGGAYDVTQFNRLAFAASLCIRASATWRPTMSEVLQVMEEWEVDKEKWEMAEEEEQEEELWGFEDLEYAYDSSFSVSLPDCWNSLG	373

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mupr10393g00001	373	FunFam	Putative receptor-like serine/threonine-protein kinase	135	349	-	-
Mupr10393g00001	373	SMART	serkin_6	57	325	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mupr10393g00001	373	ProSitePatterns	Protein kinases ATP-binding region signature.	63	85	IPR017441	GO:0005524
Mupr10393g00001	373	ProSiteProfiles	Protein kinase domain profile.	57	329	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mupr10393g00001	373	Pfam	Protein tyrosine and serine/threonine kinase	61	265	IPR001245	GO:0004672\|GO:0006468
Mupr10393g00001	373	Gene3D	Phosphorylase Kinase; domain 1	33	133	-	-
Mupr10393g00001	373	Gene3D	Transferase(Phosphotransferase) domain 1	135	352	-	-
Mupr10393g00001	373	PANTHER	OS08G0249100 PROTEIN	36	353	IPR046958	-
Mupr10393g00001	373	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	178	190	IPR008271	GO:0004672\|GO:0006468
Mupr10393g00001	373	Coils	Coil	325	345	-	-

Showing 1 to 10 of 13 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr10393g00001	Mupr-Chr10393	5690	9278	Dispersed

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr10393g00001	41	361	Trihelix Transcription Factor Family	AT5G38560	38.596	1.09e-68	226

Showing 1 to 1 of 1 entries

Previous1Next

Transcription factors information

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VI	Mupr10393g00001		PK_Tyr_Ser-Thr	7e-40	CL0016

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr10393g00001	-		-	gmx:100804983	666.766

Showing 1 to 1 of 1 entries

Previous1Next