Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10393g00001 ATGAAGTATATTCGGAGCAACAGCTTAAAGAGGCTCTTCTCGTTCGGAAGACGCGGCTTTGCGGAAGAAAACGATGTTGGGTTGGTGGTTCCTCCTTGTGAAGAGCACCCTCCAAGACCCTCTTGGAAATGCTTCTCTTATGATGAGTTGTTTCATGCCACCAATGGCTTTAGCTCAGGGAATTTTGTGGGGAAAGGAGGGTATGCTGAAGTTTATAAGGGAAGGTTGAGTGGTGGTGAGGAAATTGCGGTGAAGAGGCTCACGAGAACTTCAACGGATGAGAGGAAGGAGAAGGAGTTTCTGATAGAGATTGGAACAATTGGTCACGTGCGCCATTCAAACGTGTTGCCTCTTCTGGGGTGTTGTATTGACAATGGACTTTACCTCGTTTTTGAGCTATCCACCGTTGGTTCTGTTGCTTCTCTTATTCATGATGAGAACTTGCCTCCTTTGGATTGGAAAACAAGGTATAAGATAGTTCTTGGGACCGCACGTGGTCTTCACTACTTGCACAAAGGCTGCAAGAGGAGGATAATTCACAGGGACATCAAGGCCTCAAACATTTTGTTGACAGCAGATTTTGAACCAAAGATATCTGATTTTGGACTAGCAAGGTGGCTACCATCTGAGTGGACTCACCATTCAATAGCCCCAATAGAAGGAACATTTGGGCATTTGGCACCTGAGTACTATATGCATGGAATTGTGGATGAGAAGACAGATGTATTTGCCTTTGGTGTGTTCTTGCTTGAAGTCATCTCTGGGAGGAAACCGGTGGATGGCTCTCACCAAAGCTTGCACAGCTGGGTAGCTAAACCAATACTAAACAAGGGAGAGATAGAAAAGGTGGTAGATCCAAGGCTTGGAGGGGCTTATGATGTGACACAGTTTAATAGACTAGCCTTTGCTGCCTCCCTCTGCATCCGGGCATCTGCAACTTGGCGACCTACCATGAGTGAGGTACTGCAGGTAATGGAGGAGTGGGAGGTGGATAAAGAGAAGTGGGAAATGGCAGAAGAAGAAGAGCAAGAGGAGGAATTATGGGGTTTTGAGGATCTTGAATATGCATATGATAGTTCCTTTTCAGTGTCCCTACCTGACTGTTGGAATTCCTTAGGGTAA 1122 0.4599 MKYIRSNSLKRLFSFGRRGFAEENDVGLVVPPCEEHPPRPSWKCFSYDELFHATNGFSSGNFVGKGGYAEVYKGRLSGGEEIAVKRLTRTSTDERKEKEFLIEIGTIGHVRHSNVLPLLGCCIDNGLYLVFELSTVGSVASLIHDENLPPLDWKTRYKIVLGTARGLHYLHKGCKRRIIHRDIKASNILLTADFEPKISDFGLARWLPSEWTHHSIAPIEGTFGHLAPEYYMHGIVDEKTDVFAFGVFLLEVISGRKPVDGSHQSLHSWVAKPILNKGEIEKVVDPRLGGAYDVTQFNRLAFAASLCIRASATWRPTMSEVLQVMEEWEVDKEKWEMAEEEEQEEELWGFEDLEYAYDSSFSVSLPDCWNSLG 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10393g00001 373 FunFam Putative receptor-like serine/threonine-protein kinase 135 349 - -
Mupr10393g00001 373 SMART serkin_6 57 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10393g00001 373 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Mupr10393g00001 373 ProSiteProfiles Protein kinase domain profile. 57 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr10393g00001 373 Pfam Protein tyrosine and serine/threonine kinase 61 265 IPR001245 GO:0004672|GO:0006468
Mupr10393g00001 373 Gene3D Phosphorylase Kinase; domain 1 33 133 - -
Mupr10393g00001 373 Gene3D Transferase(Phosphotransferase) domain 1 135 352 - -
Mupr10393g00001 373 PANTHER OS08G0249100 PROTEIN 36 353 IPR046958 -
Mupr10393g00001 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Mupr10393g00001 373 Coils Coil 325 345 - -
Mupr10393g00001 373 FunFam Putative receptor-like serine/threonine-protein kinase 28 133 - -
Mupr10393g00001 373 SUPERFAMILY Protein kinase-like (PK-like) 35 329 IPR011009 -
Mupr10393g00001 373 CDD STKc_IRAK 63 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10393g00001 Mupr-Chr10393 5690 9278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10393g00001 41 361 Trihelix Transcription Factor Family AT5G38560 38.596 1.09e-68 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mupr10393g00001 PK_Tyr_Ser-Thr 7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10393g00001 - - gmx:100804983 666.766