Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10392g00001 ATGGGGAATTATCTTAGGAAACATGATTATTTTGCAACAAAGCAATATGATATATGGACATGGTACATCCCCGAGGCTGGGGAAACAGATAGATATAACAAGCAAAAGCTAGAAGAGAATAGTCTTTCTGTGAAATTGGCTTTTGCTGTCAAGTTTGTCACCTTTGACAAGTGGGTACTCATCAACAAAGCCAACATGCCAGTGAGGCAGATGAAAGAAAGCTCGGAACAACACCTTGTGATCAAACCCCATTTGCAGAATCCTATGAATCCAGCCAAGAAGACAACGAAAGCTGTCCAAAATGGCAAAGGTCCACCGCCACAAGAAAACCATAAACAAACTTTGCCTCACTCAAAGAACAAGGGAAGAAGAAGGGGGAGAGGTGGCAGAAAACCTGATCAAGGAGATGTTATGATGACGCCTAGTTGCAGGCCATGCTCTGCAACACTAGCAAGTAGTGCAAATGGGAATATTGAAAATGGTTGCATCTCTGATATGGGTTTTCCCACTTCAAGCAAGTCCTTGATCTTTGCTCGTAGGCCTGGGTATGGACAAGTTGGGACAAAATGCATCGTGAAGGCTAACCACTTCTTTGCAGAGTTACCAGACAAGGACTTGAACCAATATGATGTTACTATTACCCCAGAAGTGTCTTCTAGAACAGTAAACAGGTCCATCATAGCAGAACTTGTGAGGCTGTATAAAGAGTCTGACTTGGGGATGAGACTTCCAGCATATGATGGCAGAAAAAGTCTGTATACAGCAGGGCAGCTTCCATTTGCTTGGAGAGAGTTTAAGATTAAGCTTGTAGATGAAGAGGATGGAGTTAATGGCCCCAAAAGGGAAAGAGAGTACAGGGTGGTGATCAAGTTTGTTGCTCGGGCAAACTTGCATCACTTGGGCCAGTTTCTAGCTGGTAAGCGTGCTGATGCACCACAAGAGGCACTTCAAATTCTTGACGTTGTACTAAGAGAGCTGTCAACTAAGAGGTATTGCCCCATTGGGAGGTCCTTCTTTTCACCTGATATTAGAACACCGCAACGACTTGGAGAGGGATTAGAGTCATGGTGTGGATTTTACCAGAGCATAAGGCCTACACAAATGGGCCTTTCCCTCAATATTGATATGGCATCTGCTGCGTTTATTGAGCCTCTTCCAGTAGTGGAATTTGTTGGGCAGCTATTAGGGAAAGATGTGCTGTCAAGGCCATTGTCAGATGCTGATCGCATTAAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAGGTAACACACAGAGGAAGTGTGAGAAGAAAATATCGTGTTTCGGGGTTGACTTCTCAACCAACAAGAGAACTAGTGTTTCCTGTTGATGAGAATTCAACTATGAAATCAGTAGTTGAATACTTCCAAGAGATGTATGGTTTCACTATTCAATATACTCACCTTCCTTGCCTTCAAGTAGGAAACCAAAAGAAGGCTAACTATTTACCTATGGAGGCCTGCAAAATTGTTGAAGGGCAACGCTATACAAAAAGATTGAATGAGAAGCAAATTACTGCTCTATTAAAAGTTACTTGCCAGAGACCTCGTGATCGGGAAAATGACATATTACGGCTTAAATATCATGAAAGTGGGAAAGAAAAAAACTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGGAATTTAATCCAGATCCTGTAATCCCCATCTACAATGCCAAGCCTGAACAGGTGGAGAAAGCTTTGAAACATGTTTACCATGTATCAGCAAGCAAAACTAAGGGAAAGGAATTGGAGCTTTTGTTAGCAATACTGCCAGACAATAATGGGTCTCTCTATGGTAAGGCACATGAGGTGGTAGTGACTTTCCGAGATCGTGGTGATCTCAAGCGTATTTGTGAAACTGACCTTGGCTTAATTTCACAATGCTGTCTGACGAAGCATGTCTTCAAAATCACTAAGCAGTACTTAGCTAATGTGTCTCTGAAGATCAATGTGAAGATGGGAGGTAGAAACACTGTACTTCTTGATGCTGTAAGCTGCAGAATACCATTGGTTAGTGACATACCAACCATAATTTTTGGAGCAGATGTAACCCACCCTGAAAATGGAGAAGACACAAGCCCCTCAATAGCAGCTGTAGTAGCATCCCAGGACTGGCCTGAAGTAACAAAATATGCCGGTTTAGTGTGTGCTCAAGCTCATAGGCAGGAACTTATACAAGATTTGTACAAAACATGGCATGACCCTGTTCGTGGCACAGTTAGTGGTGGCATGATTCGAGATTTACTGGTTTCTTTTAGAAAGGCAACAGGACAAAAGCCACTACGAATTATATTTTACAGAGATGGTGTAAGTGAAGGGCAATTTTACCAAGTTTTACTTTATGAATTGGATGCGATTCGGAAGGCATGTGCTTCCTTAGAACCAAACTACCAGCCTCCAGTAACTTTCATAGTTGTGCAAAAAAGACATCATACTCGGTTATTTGCGAACAACTACAGGGACAGAAGCAGTACAGATAGGAGTGGGAATATATTGCCTGGGACTGTTGTTGATTCCAAAATCTGCCATCCAACAGAATTTGATTTTTATCTCTGCAGTCATGCTGGCATCCAGGGTACTAGTCGGCCAGCTCATTATCATGTTCTGTGGGATGAAAACAACTTCACAGCAGATGGAATTCAGTCTCTGACAAATAATCTTTGTTATACATATGCCAGGTGTACACGCTCGGTATCTGTTGTTCCTCCAGCATATTATGCACATTTAGCAGCCTTTCGGGCCCGTTTCTATATGGAACCAGATATGCAAGAGAATGGCTCTACAGGTGATGGTAATGGTCATAGTTCCAAAGGAACACGAGCAGCTGGAGATTATAGTGTCAAGCCATTGCCAGACTTGAAAGAAAATGTGAAGAGAATGTTGTCAAATTTGGCATTGTAA 2934 0.4226 MGNYLRKHDYFATKQYDIWTWYIPEAGETDRYNKQKLEENSLSVKLAFAVKFVTFDKWVLINKANMPVRQMKESSEQHLVIKPHLQNPMNPAKKTTKAVQNGKGPPPQENHKQTLPHSKNKGRRRGRGGRKPDQGDVMMTPSCRPCSATLASSANGNIENGCISDMGFPTSSKSLIFARRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGQLPFAWREFKIKLVDEEDGVNGPKREREYRVVIKFVARANLHHLGQFLAGKRADAPQEALQILDVVLRELSTKRYCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRIKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRLKYHESGKEKNCLPQVGQWNMMNKEFNPDPVIPIYNAKPEQVEKALKHVYHVSASKTKGKELELLLAILPDNNGSLYGKAHEVVVTFRDRGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAVSCRIPLVSDIPTIIFGADVTHPENGEDTSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNYRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTGDGNGHSSKGTRAAGDYSVKPLPDLKENVKRMLSNLAL 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10392g00001 977 SUPERFAMILY PAZ domain 379 533 IPR036085 GO:0005515
Mupr10392g00001 977 SMART Piwi_a_2 596 930 IPR003165 GO:0003676
Mupr10392g00001 977 Gene3D - 678 972 IPR036397 GO:0003676
Mupr10392g00001 977 Gene3D - 535 671 - -
Mupr10392g00001 977 MobiDBLite consensus disorder prediction 934 960 - -
Mupr10392g00001 977 FunFam protein argonaute 10-like 678 974 - -
Mupr10392g00001 977 Pfam PAZ domain 411 515 IPR003100 GO:0005515
Mupr10392g00001 977 SMART PAZ_2_a_3 389 521 IPR003100 GO:0005515
Mupr10392g00001 977 CDD PAZ_argonaute_like 384 498 - -
Mupr10392g00001 977 Pfam Argonaute linker 1 domain 333 382 IPR014811 -
Mupr10392g00001 977 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 552 931 - -
Mupr10392g00001 977 CDD Piwi_ago-like 533 929 IPR045246 -
Mupr10392g00001 977 SMART DUF1785_2 332 384 IPR014811 -
Mupr10392g00001 977 FunFam Protein argonaute-2 378 504 - -
Mupr10392g00001 977 Gene3D paz domain 378 503 - -
Mupr10392g00001 977 MobiDBLite consensus disorder prediction 89 113 - -
Mupr10392g00001 977 Pfam Piwi domain 623 929 IPR003165 GO:0003676
Mupr10392g00001 977 SUPERFAMILY Ribonuclease H-like 588 931 IPR012337 -
Mupr10392g00001 977 ProSiteProfiles PAZ domain profile. 385 499 IPR003100 GO:0005515
Mupr10392g00001 977 ProSiteProfiles Piwi domain profile. 596 930 IPR003165 GO:0003676
Mupr10392g00001 977 MobiDBLite consensus disorder prediction 74 141 - -
Mupr10392g00001 977 Pfam N-terminal domain of argonaute 189 323 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10392g00001 Mupr-Chr10392 6970 16267 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10392g00001 66 972 Eukaryotic Initiation Factors Gene Family AT5G43810 73.762 0.0 1456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10392g00001 K11593 - gmx:100816999 1712.58