Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10385g00003 ATGAGTCAACTCGGTCTCATACTGCAAGAATCGCTCCGCAACGAAAGAGAAGCAAGAACCATTCTGGGTCTGTTAACGGAGCAAATGGACGGAGTGGATGGAGGCCAACGGAGGAGACGGACGCTCAAAGAACGCCTCAGATTCGGCTGTTGTGGGGCCACCTGGGTTTTCCGTCATACCGTCAGGGACGAAGGACGAAACCAGCAACACCAACAGCAACAGCAAACAAATGCGGGCCAAGATCCCAACCCGAACGGGCCCGACTGCGTGGGTCCGAGTCCAAGCCCGAGCCCATCGGGGTCCGGCATGAATCTGGCGGCGGCGCTGGCCGCGGAACGCCAGTTCCGGGAATCGCATGAAACGGATGCGATCGGCGAGGGGGAGGCGAGGGGGACGCCGTGGAGGGTGTCGTTGATGCGGCTGCTGGAGGAGACGGCGGTGGAAGCAGAGAAAGGAGGGGCGGTGGGGAATGATTCTATGTGCTGCGTGTGCATGGGGAGGAAAAAAGGCGCGGCTTTCATCCCCTGTGGACACACTTTCTGTAGGGTGTGTTCGAGGGAGCTGTGGTTGAACAGAGGTACTTGTCCCCTTTGCAACCGCTCCATCCTCGAGATTCTCGACATTTTCTGA 630 0.5889 MSQLGLILQESLRNEREARTILGLLTEQMDGVDGGQRRRRTLKERLRFGCCGATWVFRHTVRDEGRNQQHQQQQQTNAGQDPNPNGPDCVGPSPSPSPSGSGMNLAAALAAERQFRESHETDAIGEGEARGTPWRVSLMRLLEETAVEAEKGGAVGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10385g00003 209 MobiDBLite consensus disorder prediction 67 83 - -
Mupr10385g00003 209 Pfam Zinc finger, C3HC4 type (RING finger) 158 203 - -
Mupr10385g00003 209 PANTHER OS01G0917900 PROTEIN 5 209 - -
Mupr10385g00003 209 SUPERFAMILY RING/U-box 155 206 - -
Mupr10385g00003 209 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 208 IPR013083 -
Mupr10385g00003 209 CDD RING-HC 161 198 - -
Mupr10385g00003 209 SMART ring_2 161 198 IPR001841 -
Mupr10385g00003 209 ProSiteProfiles Zinc finger RING-type profile. 161 199 IPR001841 -
Mupr10385g00003 209 MobiDBLite consensus disorder prediction 64 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10385g00003 Mupr-Chr10385 23737 24366 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10385g00003 21 209 C3H Transcription Factor Family AT4G22250 53.110 1.51e-57 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10385g00003 - - gmx:106799504 298.13