Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1037g00002 ATGACTACTACAAATGGTGGGACTGGGACCGAGGAGCACAAGAGAAAAACTAATGATCCTTTTCTTAAGCAAGGGGGGCACCAAAACATGCCAAGATCACCCAGATTGTGCACATCTATTAGGAAGGAATGGCCAGAGAGTTTGCCAAATGACAATGTGATTGTTAATGAGGATAATGGTTTGAATAGATATGTTACTTCCTCAGCTGGATCTGGACTTCCTAGTTCTAGTTTTTGTTCCACAATAGATTCTGAACACATTGTTGATGTTAGGAATCATAATTCAAGACAGGCTCAGAGGAATCAATTGGCTATTGAATCTAAGTATAATAGCTTGAGTAGAGAAGTTGTCCCCAAGGTTGAGGAACAGATACCACTCAGATTAAGCAAAGGACTAAAGGGAGTTGATTCTGAATTTTGGGGCCTTAAGTCTCTGCCTAGCAATATGGATAAGGCTATCATCTCAAACAATATGGATAAGGCTATCGCCTCAAACAATGCACATCTTATTAGCAGTATAACTCAGAGTACTTCATCTGCATATAATAACTATCCTCAATTGATTGTAAAGCAAACAAGGAAGGGAAAGGGGGTTCTTTGCAAAGATTTAGACAAAGGCTTCAGTATTGGAGAAGTTAAGAGCAAGGAGGATGAGAAACCTGCTTTTGCAGCCAAGTTTCAATCTGATACACTGCTGAGATCAAATGTTGATGATAATAAGCCTTTATTGGAAGGAACTTTCATATCTGGTAGCAATGGACTCAACTTAAGAGAGTGGCTGAGATCTGAAGGTCATAAAATGAAGAAATCAGGAAGGCTTCATATTTTTAAGCAGGTATTGGAATTGGTTAATTTTGCACACTCCCAACAAGGAATCGTCTTGCTAGACTTTCGACCATCTTGTTTCACTTTATTGCCTTCAAGTAAGATTAAATACATTGGTTCATATGGCCACCAACAAGGCTTGGATGATGAAGTCATGACCTGCAATGTGACTAGGAAAAGGCCTCTGGAACTGAACACCTGTGCCTGCCAAAGTTTGAGTGCAAAGCAGCAAAAGCTCTGTGAGGAGACAGGATCTTTTAGTCTGCAGTATCACTGCAATTGTATTCATGGCTTGTGGACGACACTGAATCAAACTGACTCTGACACAAACAGACCTGTGGAATCAAGGAGTAAAGAGAATCTGTGCCAAAATATTTCTAGTTGTCGCCATGCTTGTATTGAAGAAAAGCAGTTTATGTCTGTAACCATTCAGTTAGAAGAGAAGTGGTATTATAGTCCAGAAGTGCTGAATGATGGAGTTTGCACGTTGTCATCAAATATTTATAGCCTTGGAGTTCTTCTTTTTGAGTTGCTGTGCAATATTGAGTCATGGGAGGCGCATTCAACTGCGATGTTGAATTTATGTCATAGAATCTTACCACCTAAATTTCTAGCAGAAAATCCAAAGGAAGCTGGTTTTTGTCTTTGGCTTCTGCATCCTGAACCCTCTTCTCGTCCCAATGCCAGGATGATTTTAGAATCTGAATTCATACGTGAATCAGAGGAGTCAAATTCTGTAGATGATGTTGGAATATCTGATGATGAGGCTGACACAGAGCAATTACTACATTTTCTAATTTCACTCGAAGAAGAAAAGAAAAAACAGGCAGCCAAGTTGCAAGAAGAGATAAATTTTTTGAATGAAGATATTAAGGAGGTAGAAAGAAGTTATTCATTTGGGACTGATTCAGTATTTTCATTGGCACAAATGAACAATTCTGAATTGAGAGGAAACAGTTTAGTTTTTCAAGATTCTTCCAGGTCAGACATTAATAGATCCATTGGAAGGAGGTCATTTGTTGATGAAGAAAGATTTTTGAGTAATATAAATCAGCTGGAGAATTCTTATTTCTCCACAAGATTTCGAGTCCTGCCAAAAGAGGCTTCATCTGCCTCAAGCAATGATAAAAATGTGATGGAAAGTAGATGTAGGTTGCCTCTAGTAGAGAATGTTAATAAGGAGCCTAAAAGAATTCAGAGTTCTATTGGTTGTCTAGAATCCTTCTTTGAAGGTTTATGCAAGTTTGCTCGTTACAGCAAATTTGAAGAGTGTGGAAGATTAAGAAATAGTGATCTGCTTAGTTCTGCCAATGTAATGTGTGCTTTAAGTTTTGACCGTGATGAGGATTACATTGCAGCAGGAGGAGTTTCAAAGAAAATCAAGATTTTCGATCTCAATGCTATTTCAAGCAATTCCGTTGACATCCAGTACCCAGTAGTTGAGATGACAAATAAATCAAAGCTTAGCTGTGTATGCTGGAACACTTACATAAAAAATCATCTGGCATCTACTGACTATGATGGTGTGGTTCAGATGTGGGATGCAGACACTGGTCGGCCATTGTCTCAATACATGGAGCACCAAAAGAGAGCTTGGTCTGTTCACTTTTCTCTGTCAGACCCAAAAATGTTTGCTAGTGGAAGTGATGACTGCTCTGTCAAACTGTGGAATATCAGCGAGGCATGCTTTCTTTTATGCATTTTAATAAGAAATTCTCTGGGAACCATCTGGAACCCTGCCAATATATGTTGTGTTCAGTTCTCTGCTTACTCAACAAATCTTTTATTTTTTGGATCAGCTGATTACAAGGTTTATGGTTATGATCTTCGTCACACTAGGATCCCTTGGTGCACATTATCTGGTCATGGCAAAGCTGTTAGCTATGTAAAATTTGTAGATGCTGAAACAGTTGTCTCTGCTTCCACTGACAACTCTTTGAAGCTTTGGGATCTGAAGAAAACCAGCTCTTCTGGTTTGTCATCTGATGCTTGTGCCATAACCTTTAAAGGTCATAGTAATGAAAAGAATTTCGTGGGACTATCTGTTTTGGATGGATACATTGCATGTGGTTCAGAATCTAATGAGGTATACTGTTATCACAAATCACTGCCAGTGCCAATTGCTACTCATAAATTTGAGTCAATTGATCCCATTTCAGGTCATCTCAACAGTGGTGACAATAATGGACAGTTTGTTTCTAGTGTTTGCTGGAGAAAGAAATCTAACATGCTTGTTGCTGCCAACTCAGTTGGAATTGTGAAACTATTGAAGATGACTTTAGAATCTGAATTTATACGTGAATCAGAGGAATCAAATTCTGTAGATGATGTTGGAGTGTCTGATAATGAGGCTGAAACAGAGATTTTACTACATTTTCTAATTTCACTCAGAGAAGAAAAGAAGAAACAGGCAGCAAAGTTGGAAGAAGTGCTACATTTCTTGAATGAAGATATTAAGGAGATAGAAAGAAGTTATTCATTTGGGACAGATTCAGTATTTCCTTTGGCACAAATGAACAATCCTGAAGTGAGAGGAAACAGTTTACATTTTCAAGATTCTTCCAGTTCAGACATTAGTAGATCCATTGGAAGGTCATTTGTTGGTGAAGAAAGATTTAAGAGTAATATAAATCAGCTAGGGAATGCTTACTTTTCCGCGAGATTCCCAGTCCTGCCAAAAGAATCTTCATCTGTTTCAAGCAATGATAAAAATGATGTGATGGAAAGTAGATGTAGGTTGCCGCATGCAGAGAATGTAAATAATGAGCCTAGAAGAATTCAGAGTTCTGTTGATTGTCTAGCATCCTTCTGTGAAGGTTTATGCAAGTATGCTCGTTACAGCAAGTTTGAAGAGTGTGGCAGATTAAGAAATAGTGATCCACCTAGTTCTGCCAATATAATATGTGCCTTAAGTTTTGACCCTGATGAGGATTACATTGCAGCAGCAGGAATTTCAAGGAAAATCAAAATTTTTTACCTCAATAATATTTTAAGTGATTCTATTGATATCCAGTACCCAGTAGTTGAGATGTCAAATGAATCAAAGCTCAGTAGTGTGTGTTGGAACACTTGCATAAGAAATTATCTGGTATCTGCTGACTATGCTGGTGAGGTTCAGATGTGGGATGCAAGCACTGGTCAGCTATTGTCTCAATACGCGGAGCACCAAATGAGAGCTTGGTCTGTTCACTTTTCTCTGTCAGACCCAAAAATGTTTGCTAGTGGAAGTGATGACTGCTCTAGAAATTCTCTGGGAACCATCAGGAAGAATGCCAATATATGCTGTGTTCAGTTCTCTGCTGCATCAACAAATCTTTTATTTTTTGGATCATCTGATCACAAGGTTTATGGTTACGATCTTCGTCACACTAGAATCCCTTGGTGCACTTTAGCTGGTCATGGCAAAGCTGTTAGCTATGTAAAATTTATAGATGCTGAAACAGTTGTCTCTGCTTCCACTGACAACTCTTTGAAGCTTTGGGATCTGAAGAAAACCAGCTCTTCTGGTTTGTCATCTGATGCTTGTGTCATAACCTTTGAAGGTCATAGTAATAAAAAGAATTTTGTGGGATTATCTGTTTTGGATGGATACATTGCATGTGGTTCAGAATCTAATGAGGTATACTGTTATCACAAATCACTGCCAGTGCCAATTGCTACTCATAAATTTGAGTCAATTGATCCCATTTCTGGTCATCTCAATAGTGGTGATAATAATGGACAGTTTGTTTCTGGTGTTTGCTGGAGAAAGAAATCTAACATGCTTGCTGCCGCCAACTCAGTTGGAATTGTGAAACTATTGCAGATGGTCTGA 4638 0.3853 MTTTNGGTGTEEHKRKTNDPFLKQGGHQNMPRSPRLCTSIRKEWPESLPNDNVIVNEDNGLNRYVTSSAGSGLPSSSFCSTIDSEHIVDVRNHNSRQAQRNQLAIESKYNSLSREVVPKVEEQIPLRLSKGLKGVDSEFWGLKSLPSNMDKAIISNNMDKAIASNNAHLISSITQSTSSAYNNYPQLIVKQTRKGKGVLCKDLDKGFSIGEVKSKEDEKPAFAAKFQSDTLLRSNVDDNKPLLEGTFISGSNGLNLREWLRSEGHKMKKSGRLHIFKQVLELVNFAHSQQGIVLLDFRPSCFTLLPSSKIKYIGSYGHQQGLDDEVMTCNVTRKRPLELNTCACQSLSAKQQKLCEETGSFSLQYHCNCIHGLWTTLNQTDSDTNRPVESRSKENLCQNISSCRHACIEEKQFMSVTIQLEEKWYYSPEVLNDGVCTLSSNIYSLGVLLFELLCNIESWEAHSTAMLNLCHRILPPKFLAENPKEAGFCLWLLHPEPSSRPNARMILESEFIRESEESNSVDDVGISDDEADTEQLLHFLISLEEEKKKQAAKLQEEINFLNEDIKEVERSYSFGTDSVFSLAQMNNSELRGNSLVFQDSSRSDINRSIGRRSFVDEERFLSNINQLENSYFSTRFRVLPKEASSASSNDKNVMESRCRLPLVENVNKEPKRIQSSIGCLESFFEGLCKFARYSKFEECGRLRNSDLLSSANVMCALSFDRDEDYIAAGGVSKKIKIFDLNAISSNSVDIQYPVVEMTNKSKLSCVCWNTYIKNHLASTDYDGVVQMWDADTGRPLSQYMEHQKRAWSVHFSLSDPKMFASGSDDCSVKLWNISEACFLLCILIRNSLGTIWNPANICCVQFSAYSTNLLFFGSADYKVYGYDLRHTRIPWCTLSGHGKAVSYVKFVDAETVVSASTDNSLKLWDLKKTSSSGLSSDACAITFKGHSNEKNFVGLSVLDGYIACGSESNEVYCYHKSLPVPIATHKFESIDPISGHLNSGDNNGQFVSSVCWRKKSNMLVAANSVGIVKLLKMTLESEFIRESEESNSVDDVGVSDNEAETEILLHFLISLREEKKKQAAKLEEVLHFLNEDIKEIERSYSFGTDSVFPLAQMNNPEVRGNSLHFQDSSSSDISRSIGRSFVGEERFKSNINQLGNAYFSARFPVLPKESSSVSSNDKNDVMESRCRLPHAENVNNEPRRIQSSVDCLASFCEGLCKYARYSKFEECGRLRNSDPPSSANIICALSFDPDEDYIAAAGISRKIKIFYLNNILSDSIDIQYPVVEMSNESKLSSVCWNTCIRNYLVSADYAGEVQMWDASTGQLLSQYAEHQMRAWSVHFSLSDPKMFASGSDDCSRNSLGTIRKNANICCVQFSAASTNLLFFGSSDHKVYGYDLRHTRIPWCTLAGHGKAVSYVKFIDAETVVSASTDNSLKLWDLKKTSSSGLSSDACVITFEGHSNKKNFVGLSVLDGYIACGSESNEVYCYHKSLPVPIATHKFESIDPISGHLNSGDNNGQFVSGVCWRKKSNMLAAANSVGIVKLLQMV 1545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1037g00002 1545 ProSitePatterns Trp-Asp (WD) repeats signature. 912 926 IPR019775 -
Mupr1037g00002 1545 SMART serkin_6 181 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1037g00002 1545 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1405 1438 - -
Mupr1037g00002 1545 ProSitePatterns Trp-Asp (WD) repeats signature. 1423 1437 IPR019775 -
Mupr1037g00002 1545 Gene3D Transferase(Phosphotransferase) domain 1 252 524 - -
Mupr1037g00002 1545 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 894 927 - -
Mupr1037g00002 1545 SUPERFAMILY WD40 repeat-like 714 1033 IPR036322 GO:0005515
Mupr1037g00002 1545 ProSiteProfiles Trp-Asp (WD) repeats profile. 799 834 IPR001680 GO:0005515
Mupr1037g00002 1545 ProSiteProfiles Protein kinase domain profile. 156 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1037g00002 1545 Coils Coil 544 571 - -
Mupr1037g00002 1545 MobiDBLite consensus disorder prediction 1 34 - -
Mupr1037g00002 1545 Pfam WD domain, G-beta repeat 799 832 IPR001680 GO:0005515
Mupr1037g00002 1545 Pfam WD domain, G-beta repeat 893 925 IPR001680 GO:0005515
Mupr1037g00002 1545 Coils Coil 1538 1545 - -
Mupr1037g00002 1545 SUPERFAMILY WD40 repeat-like 1240 1541 IPR036322 GO:0005515
Mupr1037g00002 1545 PANTHER PROTEIN SPA1-RELATED 2 1035 1545 IPR044630 GO:0009640
Mupr1037g00002 1545 ProSiteProfiles Trp-Asp (WD) repeats profile. 1405 1445 IPR001680 GO:0005515
Mupr1037g00002 1545 Gene3D - 683 1035 IPR015943 GO:0005515
Mupr1037g00002 1545 Gene3D - 1212 1545 IPR015943 GO:0005515
Mupr1037g00002 1545 ProSiteProfiles Trp-Asp (WD) repeats profile. 894 934 IPR001680 GO:0005515
Mupr1037g00002 1545 SMART WD40_4 844 883 IPR001680 GO:0005515
Mupr1037g00002 1545 SMART WD40_4 704 739 IPR001680 GO:0005515
Mupr1037g00002 1545 SMART WD40_4 792 832 IPR001680 GO:0005515
Mupr1037g00002 1545 SMART WD40_4 750 789 IPR001680 GO:0005515
Mupr1037g00002 1545 SMART WD40_4 986 1032 IPR001680 GO:0005515
Mupr1037g00002 1545 SMART WD40_4 1497 1543 IPR001680 GO:0005515
Mupr1037g00002 1545 SMART WD40_4 1223 1267 IPR001680 GO:0005515
Mupr1037g00002 1545 SMART WD40_4 1320 1354 IPR001680 GO:0005515
Mupr1037g00002 1545 SMART WD40_4 1447 1486 IPR001680 GO:0005515
Mupr1037g00002 1545 SMART WD40_4 1278 1317 IPR001680 GO:0005515
Mupr1037g00002 1545 SMART WD40_4 1355 1394 IPR001680 GO:0005515
Mupr1037g00002 1545 SMART WD40_4 887 925 IPR001680 GO:0005515
Mupr1037g00002 1545 SMART WD40_4 936 975 IPR001680 GO:0005515
Mupr1037g00002 1545 SMART WD40_4 1398 1436 IPR001680 GO:0005515
Mupr1037g00002 1545 PRINTS G protein beta WD-40 repeat signature 819 833 IPR020472 -
Mupr1037g00002 1545 PRINTS G protein beta WD-40 repeat signature 912 926 IPR020472 -
Mupr1037g00002 1545 PRINTS G protein beta WD-40 repeat signature 1423 1437 IPR020472 -
Mupr1037g00002 1545 Coils Coil 1072 1099 - -
Mupr1037g00002 1545 SUPERFAMILY Protein kinase-like (PK-like) 253 515 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1037g00002 Mupr-Chr1037 22325 39993 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1037g00002 796 989 Miscellaneous Gene Families AT5G08390 25.641 5.93e-08 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Mupr1037g00002 WD40 0.15 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1037g00002 K16240 - gmx:100802144 1715.66