Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10349g00001 ATGGCGTCAATTAACTGGTTATTGGATTTCTCTCGCTCCCCTCAAGAACTTCCACCGCAAACCGCTAATAATGAAGATCGCTCTCAAACGGTGACCCCTCACGAAATCACAGCCACCGATTGCTTTGATCTTACTTCATTTGGCCTAGTAGAAGCACTCAACCGAAACAATACTCATCATATAACTTCTCCAGATTGGGACACAAAAGGTTTGGGAACATCATGTAGTAGTAACAAAAACATGGACAACCAACAGCACCTGAAACTCGAAAACTTTCTCTCGAAAAAACCGGCAACCGGCGGTGGTGGTAGTCCAAAACACACCAACTCTATCGGGTTGTCCATGATAAAGACATGGCTGAGGAACCAAACGTCACCGTCAGATGCTGCAAACACATCGCTTTCCATGAGCACGGCAGTGTCACAGTCAGGCACAGTAGCATTACCCCTTCTAACTGTGGATGGAGAGAGTAAGAAACAACCCTCGACGACGGCACTTGATAATAACCAAAGCGGAACAGTTAATGTCTCCACTGTGCCTAGAAAATCCGCTGACATATTGGGACAAAGGACTTCCATATACCGTGGTGTAACAAGGCATAGATGGACGGGTAGATATGAGGCTCACCTGTGGGACAATAGTTGTAGAAGAGAGGGGCAAACTCGCAAAGGAAAGCAAGGAGGTTATGATAAAGAAGAAAAGGCAGGTAGAACGTATGATTTGGCGGCACTTAAATACTGGGGAACGACAACAACAACAAATTTTCCAGTAAATTCCACGTTTTCCCTTTCTCTCACGTTTTGTCTCCCTCTCATACTTGTTAAATTTATAATTAGTCACTATGAAAAAGAATTGGAAGAAATGAAGAACATGACAAGGCAAGAGTACGTAGCATCACTGAGAAGGAAGAGCAGTGGGTTTTCTCGCGGCGCATCTATTTATCGAGGAGTAACGAGGCATCACCAACATGGTAGATGGCAAGCTAGGATTGGAAGAGTCGCAGGCAACAAAGATGTCTACCTGGGAACTTTTAGCACCCAAGAAGAGGCAGCAGAGGCATATGACGTTGCAGCCATCAAATTCCGAGGACTGAAGGCAGTTACAAACTTCGACATGAGCAAATACAACGTTAGGAGCATACTTGAGAGTAGCACTTTGCCCATTGGTGGTGCTGCCAAACGTTTGAAGGATGTTGAACAGGTCGATCACACCATCATGGATCCTCAAACTGCTCACATGTATGATTCTAATATCAATTCTTTTGGAGCTCCTCATCCTCTTGCATTCCACCAACCTCATCCTTATTATAGCCACTTGAATTACACCAATGGACAAAAGTTTTGGTGCAAGCAAAAACAAGATTATGGTGTTCCTCAAAGCTTTCAAGATATTCATCAACTCCAACTGGGGAATACCCACAATTTTCTTCAGTCCAATAATTCTGCTTCCATCGATTGTGGATCTAACTCTGACATTTATGGTGGTGGGCATGGTTACGTGATTCCTGTTGCTACTACTTTCATTGACGATGTTAATCAAAATAATAGGAGCAACGATTTTGAGGATAATGATGTGAAGATGTTTAGTTACGAAAATTTAAGGGTAGTGCATATGATGCATAACAATACTTGGGTGCCAACTATTCCCACTCTTGCACCAAGGCATAGCAATGTGGCTCTCTGCCCCGAAGCTTCCCTGTTCATATTGTTGCATGAATAG 1719 0.4351 MASINWLLDFSRSPQELPPQTANNEDRSQTVTPHEITATDCFDLTSFGLVEALNRNNTHHITSPDWDTKGLGTSCSSNKNMDNQQHLKLENFLSKKPATGGGGSPKHTNSIGLSMIKTWLRNQTSPSDAANTSLSMSTAVSQSGTVALPLLTVDGESKKQPSTTALDNNQSGTVNVSTVPRKSADILGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGKQGGYDKEEKAGRTYDLAALKYWGTTTTTNFPVNSTFSLSLTFCLPLILVKFIISHYEKELEEMKNMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDVYLGTFSTQEEAAEAYDVAAIKFRGLKAVTNFDMSKYNVRSILESSTLPIGGAAKRLKDVEQVDHTIMDPQTAHMYDSNINSFGAPHPLAFHQPHPYYSHLNYTNGQKFWCKQKQDYGVPQSFQDIHQLQLGNTHNFLQSNNSASIDCGSNSDIYGGGHGYVIPVATTFIDDVNQNNRSNDFEDNDVKMFSYENLRVVHMMHNNTWVPTIPTLAPRHSNVALCPEASLFILLHE 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10349g00001 572 CDD AP2 192 258 IPR001471 GO:0003700|GO:0006355
Mupr10349g00001 572 SMART rav1_2 313 377 IPR001471 GO:0003700|GO:0006355
Mupr10349g00001 572 SMART rav1_2 193 262 IPR001471 GO:0003700|GO:0006355
Mupr10349g00001 572 CDD AP2 312 373 IPR001471 GO:0003700|GO:0006355
Mupr10349g00001 572 SUPERFAMILY DNA-binding domain 312 373 IPR016177 GO:0003677
Mupr10349g00001 572 FunFam AP2-like ethylene-responsive transcription factor ANT 192 258 - -
Mupr10349g00001 572 MobiDBLite consensus disorder prediction 8 31 - -
Mupr10349g00001 572 MobiDBLite consensus disorder prediction 157 176 - -
Mupr10349g00001 572 MobiDBLite consensus disorder prediction 59 81 - -
Mupr10349g00001 572 ProSiteProfiles AP2/ERF domain profile. 193 256 IPR001471 GO:0003700|GO:0006355
Mupr10349g00001 572 ProSiteProfiles AP2/ERF domain profile. 313 371 IPR001471 GO:0003700|GO:0006355
Mupr10349g00001 572 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 82 410 - -
Mupr10349g00001 572 Gene3D AP2/ERF domain 193 258 IPR036955 GO:0003700|GO:0006355
Mupr10349g00001 572 Gene3D AP2/ERF domain 313 373 IPR036955 GO:0003700|GO:0006355
Mupr10349g00001 572 SUPERFAMILY DNA-binding domain 192 258 IPR016177 GO:0003677
Mupr10349g00001 572 Pfam AP2 domain 193 248 IPR001471 GO:0003700|GO:0006355
Mupr10349g00001 572 Pfam AP2 domain 313 363 IPR001471 GO:0003700|GO:0006355
Mupr10349g00001 572 FunFam AP2-like ethylene-responsive transcription factor 312 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10349g00001 Mupr-Chr10349 6358 11019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10349g00001 110 506 AP2-EREBP Transcription Factor Family AT5G17430 52.392 2.82e-124 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mupr10349g00001 AP2 3e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10349g00001 K09285 - gmx:100808723 575.859