LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr10337g00004	ATGAAAAACCTATCACTTTACCTTCTGCTTTTTTTATTCGCAGCCGCCATGTGCGGAATCCTCGCAGTGTTGGGTTGCGTTGACAACTCTCAGGCCAAGCGCGCTCGCATCATCGAATTGTCTCGCAGGTTGCGGCATAGAGGTCCTGATTGGAGTGGCATACATTGCCATGAGGATTGTTACCTTGCTCATCAACGCCTTGCTATTGTTGACCCTACTTCAGGGGATCAACCTTTGTACAACGAAGACAAGACTGTTATTGTCACAGTTAATGGGGAGATATACAACCACAAGCAATTGAGACAGAAACTGAGTTCCCATCAATTTAGAACTGGTAGTGATTGTGAAGTGATTGCCCATCTTTATGAAGAATATGGAGAGGAGTTTGTTGATATGCTGGATGGGATGTTCGCCTTTATTCTTCTTGATACTCGTGATAAAAGTTTTATTGCTGCTCGTGATGCCATTGGCATTACCCCTCTTTACATGGGCTGGGGTCATGATGGATCAACATGGTTTGCATCTGAAATGAAAGCTCTGAGTGATGATTGTGAGAGATTTATATCTTTTCCTCCAGGGCATATATATTCCAGCAAACAGGGAGGATTAAGAAGGTGGTACAATCCACCATGGTTTCCAGAGCATATTCCATCAACTCCCTATGATCCATTGATTTTGCGTAAGAGCTTTGAGAGGGCTGTAGTTAAGAGAATGATGACTGATGTGCCTTTTGGAGTTCTTTTGTCCGGAGGATTGGACTCATCACTTGTTGCTTCTGTGGTCAATCGTTTTTTGGCCGAATCTGAAGCAGCTCGACAATGGGGATCACAGTTACACACTTTCTGTATTGGTTTGAAGGGTTCTCCGGACTTGAAAGCTGCAAAAGAGGTAGCAGATTATCTTGGTACTCGTCACCACGAACTTTATTTCACTGTTCAGGAAGGTATAGATGCACTTGAAGAAGTCATTTACCACATTGAAACATATGATGTAACGACTATCAGAGCAAGTACTCCAATGTTTCTTATGTCCAGAAAAATTAAAGCCTTGGGAGTGAAAATGGTTCTTTCTGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTATTTCCACAAGGCGCCGAACAAGAAAGAGTTTCACGAAGAAACATGTCGAAAAATTAAAGCTCTTCATCTTTATGACTGCCTGAGAGCCAATAAATCCACTGCAGCATGGGGTGTGGAGGCACGTGTACCATTCTTAGATAAAGAATTTATCAACATAGCCATGAGCATAGATCCGGAGTGGAAAATGATAAGGCCTGATCTTGGAAGGATAGAGAAGTGGATACTACGCAATGCATTTGATGATGATAAGAATCCATATTTACCAAAGCACATATTGTACAGGCAGAAGGAACAGTTCAGCGATGGGGTTGGTTACAGCTGGATTGATGCCTTGAAGGATCACGCCAACAAACAAGTCACAGATGCAACGTTGACGGCTGCCAACTTTATTTACCCTGAAAACACTCCTACTACAAAAGAAGGATACCTCTATAGGACAATTTTTGAGAAGTTCTTTCCAAAGAATGCAGCAAGGTCAACAGTTCCAGGAGGTCCTAGTGTGGCATGCAGTACTGCAAAAGCCGTGGAATGGGACGCAGCATGGTCAAAAAATCTTGACCCTTCTGGTCGTGCCGCTCTTGGTGTTCATTCAGCTGCTTATGAGGCTTCAGTGGATACCAAAATTGACAGCCCAAAAATGGACCCCTTTACAGACCCATGA	1770	0.4316	MKNLSLYLLLFLFAAAMCGILAVLGCVDNSQAKRARIIELSRRLRHRGPDWSGIHCHEDCYLAHQRLAIVDPTSGDQPLYNEDKTVIVTVNGEIYNHKQLRQKLSSHQFRTGSDCEVIAHLYEEYGEEFVDMLDGMFAFILLDTRDKSFIAARDAIGITPLYMGWGHDGSTWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPWFPEHIPSTPYDPLILRKSFERAVVKRMMTDVPFGVLLSGGLDSSLVASVVNRFLAESEAARQWGSQLHTFCIGLKGSPDLKAAKEVADYLGTRHHELYFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKALGVKMVLSGEGSDEIFGGYLYFHKAPNKKEFHEETCRKIKALHLYDCLRANKSTAAWGVEARVPFLDKEFINIAMSIDPEWKMIRPDLGRIEKWILRNAFDDDKNPYLPKHILYRQKEQFSDGVGYSWIDALKDHANKQVTDATLTAANFIYPENTPTTKEGYLYRTIFEKFFPKNAARSTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHSAAYEASVDTKIDSPKMDPFTDP	589

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr10337g00004	589	Pfam	Glutamine amidotransferase domain	64	181	IPR017932	-
	Mupr10337g00004	589	SUPERFAMILY	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	16	211	IPR029055	-
	Mupr10337g00004	589	PANTHER	ASPARAGINE SYNTHETASE	17	571	-	-
	Mupr10337g00004	589	Gene3D	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	18	208	IPR029055	-
	Mupr10337g00004	589	Pfam	Asparagine synthase	226	378	IPR001962	GO:0004066\|GO:0006529
	Mupr10337g00004	589	CDD	Asn_Synthase_B_C	227	472	IPR001962	GO:0004066\|GO:0006529
	Mupr10337g00004	589	ProSiteProfiles	Glutamine amidotransferase type 2 domain profile.	18	201	IPR017932	-
	Mupr10337g00004	589	FunFam	Asparagine synthetase [glutamine-hydrolyzing]	18	208	-	-
	Mupr10337g00004	589	FunFam	Asparagine synthetase [glutamine-hydrolyzing]	211	530	-	-
	Mupr10337g00004	589	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	26	-	-
	Mupr10337g00004	589	PIRSF	Asn_synthetase_glu-h	17	379	IPR006426	GO:0004066\|GO:0006529
	Mupr10337g00004	589	PIRSF	Asn_synthetase_glu-h	372	533	IPR006426	GO:0004066\|GO:0006529
	Mupr10337g00004	589	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	212	500	-	-
	Mupr10337g00004	589	Gene3D	HUPs	211	530	IPR014729	-
	Mupr10337g00004	589	CDD	AsnB	18	208	IPR033738	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr10337g00004	Mupr-Chr10337	27366	33311	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr10337g00004	18	180	PRT Gene Family	AT4G34740	27.751	3.80e-07	51.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr10337g00004	K01953		-	gmx:732660	1119.76