Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10330g00001 ATGGGGGTCGTGATGAGAAACTCTGAAGCAACAACACATGTGGGGATGGAGATAGAAGCAACTAGGCCATCGGGGAACAATGGTTCAACCCTCCCAGGGTTGAGTCCTTTGAGTGAGACCCTTTGGAGGGAAAAAGCCAACACGGATATCATTGGAGATGTCTCCGCAAGGCTCACATGGAAGGATCTCACTGTCATGGTCACTCTCAGCAACGGTGAGACACAAAACGTTTTGGAGGGTCTAACTGGCTATGCTGAACCAGGAACCTTCACTGCTCTCATGGGTCCTTCAGGCTCAGGAAAATCCACTCTTCTTGATGCTCTCTCTAGTCGTCTCGCTGCAAATGCCTTCCTCTCAGGCACAATCCTCCTCAATGGACGCAAAGCCAAACTCTCTTTTGGCACTGCAGCTTATGTGACACAAGATGACAACTTGATCGGTACCCTAACGGTGCGAGAAACGATATCATATTCGGCTCGTTTGCGTTTGCCGGATAAGATGCCATGGGCAGATAAGAGAGCATTGGTTGAGAGCACAATTGTGGCGATGGGTCTTCAAGATTGTGCTGACACAGTGATTGGAAATTGGCACTTGCGTGGGATCAGTGGTGGAGAGAAGAGAAGAGTTAGCATTGCGTTGGAAATATTGATGAGGCCTAGGTTGCTTTTCCTTGATGAGCCAACTAGTGGACTTGACAGTGCTTCAGCTTTCTTTGTGACTCAGACACTACGTGCCTTGGCAAGGGATGGGAGAACAGTGATAGCCTCTATTCACCAGCCAAGCAGTGAAGTGTTTGAGCTATTTGACCAATTGTACTTGCTCTCTAGTGGCAAAACTGTTTATTTTGGGCAAGCTTCGGAAGCATATGAGTTCTTTGCACAAGCTGGCTTTCCATGTCCTGCTTTGAGGAACCCTTCTGATCATTTCCTCAGGTGCATCAATTCTGACTTTGACAAAGTCAAGGCCACTCTTAAAGGGTCCATGAAACTCAGGTTTGAGGGGAGCGATGATCCTTTGGACAGGATCACTACTGCTGAAGCTATCAGAACTCTAATTGACTACTATCGCACTTCTCAACACTCTTATGCTGCAAGACAAAAAGTGGATGAGATATCCAAAGTTAAGGGAACAGTGCTTGAAGCTGGAGGAAGTGAGGCTAGTTTCTTGATGCAGTCTTACACCTTAACCAAGCGTTCCTTTATCAACATGTCAAGGGACTTTGGCTACTACTGGCTTAGGCTTGTTATCTACATTGTAGTCACTATCTGTATTGGGACCATTTATTTGAACGTGGGGACAGGCTACAACTCGATTCTGGCTAGGGGTTCTTGTGCATCTTTTGTCTTTGGTTTTGTCACCTTCATGTCAATTGGTGGATTCCCTTCATTTGTTGAAGACATGAAGGTTTTCCAAAGAGAGAGGCTTAATGGCCACTATGGTGTCACTGCATTTGTCATCAGCAACACATTATCTGCAATGCCCTTCCTGATTTTGATCACTTTTCTCTCTGGAACCATTTGTTACTTCATGGTTCGCCTACACCCTGGTTTTTGGCACTACCTCTTCTTTGTATTGTGCCTTTATGCCAGTGTGACAGTGGTTGAAAGCTTAATGATGGCAATTGCTAGCATTGTCCCCAATTTCCTCATGGGCATCATTATTGGAGCAGGGATTCAGGGCATATTCATGTTGGTGTCTGGATACTTTAGGCTCCCACATGATATCCCAAAGCCAGTCTGGCGCTACCCAATGTCATACATCAGTTTCCACTTCTGGGCACTACAGGGTCAGTACCAGAATGATTTGCGGGGCTTGATATTTGACAACCAGACACCAGACCTTCCAAAGATACCAGGCGAATACATATTGGAAAAAGTGTTCCAAATTGATGTGAACAGATCAAAGTGGATAAACTTGAGTGTGATCTTCAGCATGATTGTGATCTACCGCATTATTTTCTTCATCATGATAAAAATCAACGAAGATGTGACACCATGGGTCAGAGGGTACCTTGCTAGGAGGAGAATGCAGCAGAAGAGTGGAACTCAGAATACAACTATTGCACCTGATGTTCTCACTCAGTCACCATCTCTCAGAACCTATGTTTCCAACCAAACAAAATGA 2124 0.4534 MGVVMRNSEATTHVGMEIEATRPSGNNGSTLPGLSPLSETLWREKANTDIIGDVSARLTWKDLTVMVTLSNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMPWADKRALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSSGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEGSDDPLDRITTAEAIRTLIDYYRTSQHSYAARQKVDEISKVKGTVLEAGGSEASFLMQSYTLTKRSFINMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVISNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPVWRYPMSYISFHFWALQGQYQNDLRGLIFDNQTPDLPKIPGEYILEKVFQIDVNRSKWINLSVIFSMIVIYRIIFFIMIKINEDVTPWVRGYLARRRMQQKSGTQNTTIAPDVLTQSPSLRTYVSNQTK 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10330g00001 707 Gene3D - 52 296 IPR027417 -
Mupr10330g00001 707 FunFam ABC transporter G family member 11 52 295 - -
Mupr10330g00001 707 CDD ABCG_EPDR 55 283 - -
Mupr10330g00001 707 ProSitePatterns ABC transporters family signature. 201 215 IPR017871 GO:0005524|GO:0016887
Mupr10330g00001 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 295 IPR027417 -
Mupr10330g00001 707 Pfam ABC-2 type transporter 391 597 IPR013525 GO:0016020|GO:0140359
Mupr10330g00001 707 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 58 301 IPR003439 GO:0005524
Mupr10330g00001 707 Pfam ABC transporter 80 229 IPR003439 GO:0005524
Mupr10330g00001 707 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 47 679 - -
Mupr10330g00001 707 SMART AAA_5 87 258 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10330g00001 Mupr-Chr10330 4220 10239 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10330g00001 88 289 Calmodulin-binding Proteins AT2G36910 32.394 4.09e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10330g00001 K05681 - gmx:100803731 1344.72