Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10307g00006 ATGAGATTTGAGTGTTGGTTGGTCCCACCAGAGGTAGCAGAGAAAACAATGGCACCTTTTGTGTTAACTGTATCACAAGACGGAAGTGGACAGTACCGGACGGTGCAGGAAGCCATAGATGCGGTGCCACTCGGCAACACTCGCCGGACGGTGATTCGGGTGTCGCCGGGAACCTACCGCCAGCCCGTCTACGTGGCAAAGACTAAGAACTTCATCACCCTTGCTGGCTTGGGCCCTGAGGACACTGTTCTCACTTGGAATAACACTGCTACCTCAATCAGCCACCACCAGGATGCTAGGCTGATAGGGACTGGCACCTTTGCTTGTGGCAGCATCATTGTGGAAGGAGGGGACTTCATTGCTGAGAATATTACCTTTGAGAATTCTTCTCCTCAGGGTTCAGGGCAAGCAGTGGCAGTTAGAGTAACAGCAGATTGTTGTGCTTTCTATAATTGCAGGTTCCTTGGATGGCAGGACACACTGTACTTACATTATGGAAAACAATATTTGAAAGATTGCTACATTGAAGGGAGTGTGGACTTCATTTTTGGTAATAGTACTGCACTCTTTGAACATTGTCACATCCATTGCAAGTCTTCAGGGTTCATCACTGCACAGAGCAGAAGCACTCCACAGGAAGCAACTGGTTATGTATTCCTGAGATGTGTTATCACAGGTAATGGAGGAACTTCATGTGCATATCTCGGACGACCATGGAGACCTTTTGCAAGAGTGGTCTTTGCATTCACTTATATGGATCACTGTATAAAGCCTACTGGTTGGGATAATTGGGGGAAAATTGAGAACGAAAAAACTGCTTGCTTCTGTGAATACAGGTGTTTTGGACCCGGGTTCCGTCCATCTGAACGAGTAAAATGGGCTACAGAATTAAAGGATGAAGGAGCAAAGCAGTTTCTCATGCATAGCTTTATTGACCCAGAAACAGAGAGACCTTGGCTTGCTCAAAGAATGGCCTTGAGGATTCCATATTCTGCTTAA 999 0.4655 MRFECWLVPPEVAEKTMAPFVLTVSQDGSGQYRTVQEAIDAVPLGNTRRTVIRVSPGTYRQPVYVAKTKNFITLAGLGPEDTVLTWNNTATSISHHQDARLIGTGTFACGSIIVEGGDFIAENITFENSSPQGSGQAVAVRVTADCCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALFEHCHIHCKSSGFITAQSRSTPQEATGYVFLRCVITGNGGTSCAYLGRPWRPFARVVFAFTYMDHCIKPTGWDNWGKIENEKTACFCEYRCFGPGFRPSERVKWATELKDEGAKQFLMHSFIDPETERPWLAQRMALRIPYSA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10307g00006 332 Gene3D - 19 325 IPR012334 -
Mupr10307g00006 332 SUPERFAMILY Pectin lyase-like 17 319 IPR011050 -
Mupr10307g00006 332 FunFam Pectinesterase 18 325 - -
Mupr10307g00006 332 ProSitePatterns Pectinesterase signature 2. 175 184 IPR033131 -
Mupr10307g00006 332 Pfam Pectinesterase 23 312 IPR000070 GO:0030599|GO:0042545
Mupr10307g00006 332 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 16 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10307g00006 Mupr-Chr10307 23951 28334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10307g00006 21 325 Carbohydrate Esterase AT5G47500 39.683 8.86e-72 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10307g00006 K01051 - gmx:100810259 597.43