Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10306g00001 ATGAAGAAGCTACCTGTATCTTTCATCAACAGCTACACTCTCTCCCTCCCCACTTCCCACTACCCACTCCCCGCCGCAGCTAACACTTCCGGCGACTTCTCCGATCGCTTTCCGGCGACACTTCATCCGAAGCCATGGCAACAGAATGAGCCGCCGCCGATCGCCATGTCGGTCTCCTACTCCAACTGCTTCCCCGACTCCTACCTCCTCTGCGGTGAGGACTCCTCCGAAATCTTGTCCGGAGACTCGCCGGAATGTTCCTCCGACCTCGATTCCTCGCCGCCGTCGGAGGAGGAGTCCATAGCCGGATTCATCGAAGATGAGCGCAACTTCGTTCCCGGATTCGACTACCTCAACAGGTTCCAATCTCGCTCTCTCGATGCCTCCGCCAGAGAAGAATCCGTTGCATGGATTCTCAAGGTAACTACCTCTCCGCACCAATACCTTTTCTCATCGTCGTTCCTAATCGGACACTGTATTGCATTCATATTACGATATTGCCACGCGCGTCGAATACCGAACCGGACGGTGCTAAAATGCGCCGCTCGTAACTGTCTTCAGAAAACGGTACAGGCTAATTACGCTTTTCAACCGCTCACGGCTTATCTTTCCGTTAACTACATGGATCGGTTCTTGAATTCTCGGCCGTTGCCGCAAACGAATGGGTGGCCACTGCAACTTCTATCAGTTGCGTGCTTGTCTTTAGCGGCAAAGATGGAGGAACCTCTAGTTCCGTCTCTATTGGACCTTCAGTCACATTTATGTATAAAAAAGAGAGGCACATTCTTGATAAAGTTTCTTTTTACAAAAATTAAAAATATGGATATAATGATTAAATTATACTTCCTCAGTTGTCGACTTGTCGCTAGTTACGTAGAAGGTGCCAAATACATATTTGAGCCCAGAACAATTAGAAGGATGGAGCTACTTGTCCTGGGCGTCTTGGATTGGAGGCTAAGATCGGTTACCCCATTTAGCTTCCTCGATTTCTTTGCGTGCAAGTTAGATTCAACTGGAACTTTTACCGGGTTCCTCATTTCACGTGCTACTCAAATTATCTTATCCAATATCAAAGAGGCCAGTTTTCTTGCCTATTGGCCATCATGCATTGCTGCCGCGGCCATTCTCCATGCAGCTAACGAAATTCCTAATTGGTCTCTCGTTAAGCCTGAGCATGCAGAGTCGTGGTGCGAGGGGCTAAGAAAGGAGAAAATTATAGGGTGCTATCAATTAATGCAAGAACTTGTGATTGACAATAACCGGAGGAAACCTCCCAAAGTGTTACCACAGCTGCGAGTGACATCTCGGCCCCTTACGAGGTCAAGTGTCTCGTCATTCTCAGCATCCTCCTCTTCTCCTTCATCCTCATTGTCTTGTAAAAGGAGGAAATTAAATAACTGTTTGTGGGTAGATGATGACAAAGGAAATTCCCAGTGA 1437 0.4781 MKKLPVSFINSYTLSLPTSHYPLPAAANTSGDFSDRFPATLHPKPWQQNEPPPIAMSVSYSNCFPDSYLLCGEDSSEILSGDSPECSSDLDSSPPSEEESIAGFIEDERNFVPGFDYLNRFQSRSLDASAREESVAWILKVTTSPHQYLFSSSFLIGHCIAFILRYCHARRIPNRTVLKCAARNCLQKTVQANYAFQPLTAYLSVNYMDRFLNSRPLPQTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQSHLCIKKRGTFLIKFLFTKIKNMDIMIKLYFLSCRLVASYVEGAKYIFEPRTIRRMELLVLGVLDWRLRSVTPFSFLDFFACKLDSTGTFTGFLISRATQIILSNIKEASFLAYWPSCIAAAAILHAANEIPNWSLVKPEHAESWCEGLRKEKIIGCYQLMQELVIDNNRRKPPKVLPQLRVTSRPLTRSSVSSFSASSSSPSSSLSCKRRKLNNCLWVDDDKGNSQ 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10306g00001 478 SUPERFAMILY Cyclin-like 304 421 IPR036915 -
Mupr10306g00001 478 PANTHER CYCLINS 135 419 IPR039361 -
Mupr10306g00001 478 SMART cyclin_7 185 313 IPR013763 -
Mupr10306g00001 478 SUPERFAMILY Cyclin-like 190 319 IPR036915 -
Mupr10306g00001 478 SMART Cyclin_C_2 322 449 IPR004367 -
Mupr10306g00001 478 Gene3D - 186 282 - -
Mupr10306g00001 478 CDD CYCLIN_AtCycD-like_rpt2 322 412 - -
Mupr10306g00001 478 CDD CYCLIN_AtCycD-like_rpt1 189 317 - -
Mupr10306g00001 478 Pfam Cyclin, N-terminal domain 190 319 IPR006671 -
Mupr10306g00001 478 Gene3D - 300 426 - -
Mupr10306g00001 478 Pfam Cyclin, C-terminal domain 322 427 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10306g00001 Mupr-Chr10306 6833 9490 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10306g00001 54 478 Core Cell Cycle Gene Families AT1G70210 51.049 3.64e-122 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10306g00001 K18810 - gmx:100780369 533.872